Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4953 and Pf6N2E2_4954 are separated by 11 nucleotides Pf6N2E2_4954 and Pf6N2E2_4955 are separated by 456 nucleotides
Pf6N2E2_4953 - Putative lipase in cluster with Phosphatidate cytidylyltransferase, at 5,708,528 to 5,710,285
_4953
Pf6N2E2_4954 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5), at 5,710,297 to 5,710,920
_4954
Pf6N2E2_4955 - acetyltransferase, GNAT family, at 5,711,377 to 5,711,835
_4955
Position (kb)
5710
5711 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5709.324 kb on + strand, within Pf6N2E2_4953 at 5709.324 kb on + strand, within Pf6N2E2_4953 at 5709.672 kb on + strand, within Pf6N2E2_4953 at 5709.729 kb on + strand, within Pf6N2E2_4953 at 5709.730 kb on - strand, within Pf6N2E2_4953 at 5709.777 kb on + strand, within Pf6N2E2_4953 at 5709.777 kb on + strand, within Pf6N2E2_4953 at 5709.778 kb on - strand, within Pf6N2E2_4953 at 5709.846 kb on + strand, within Pf6N2E2_4953 at 5709.846 kb on + strand, within Pf6N2E2_4953 at 5709.847 kb on - strand, within Pf6N2E2_4953 at 5709.847 kb on - strand, within Pf6N2E2_4953 at 5709.847 kb on - strand, within Pf6N2E2_4953 at 5709.847 kb on - strand, within Pf6N2E2_4953 at 5710.298 kb on + strand at 5710.298 kb on + strand at 5710.299 kb on - strand at 5710.299 kb on - strand at 5710.299 kb on - strand at 5710.359 kb on + strand at 5710.359 kb on + strand at 5710.359 kb on + strand at 5710.359 kb on + strand at 5710.360 kb on - strand, within Pf6N2E2_4954 at 5710.360 kb on - strand, within Pf6N2E2_4954 at 5710.360 kb on - strand, within Pf6N2E2_4954 at 5710.360 kb on - strand, within Pf6N2E2_4954 at 5710.360 kb on - strand, within Pf6N2E2_4954 at 5710.360 kb on - strand, within Pf6N2E2_4954 at 5710.360 kb on - strand, within Pf6N2E2_4954 at 5710.361 kb on + strand, within Pf6N2E2_4954 at 5710.361 kb on + strand, within Pf6N2E2_4954 at 5710.361 kb on + strand, within Pf6N2E2_4954 at 5710.362 kb on - strand, within Pf6N2E2_4954 at 5710.362 kb on - strand, within Pf6N2E2_4954 at 5710.639 kb on + strand, within Pf6N2E2_4954 at 5710.640 kb on - strand, within Pf6N2E2_4954 at 5710.640 kb on - strand, within Pf6N2E2_4954 at 5710.853 kb on + strand, within Pf6N2E2_4954 at 5710.853 kb on + strand, within Pf6N2E2_4954 at 5710.854 kb on - strand, within Pf6N2E2_4954 at 5710.907 kb on + strand at 5710.907 kb on + strand at 5710.907 kb on + strand at 5710.907 kb on + strand at 5710.907 kb on + strand at 5710.907 kb on + strand at 5710.908 kb on - strand at 5710.957 kb on - strand at 5710.957 kb on - strand at 5710.958 kb on + strand at 5710.958 kb on + strand at 5710.958 kb on + strand at 5710.958 kb on + strand at 5710.958 kb on + strand at 5710.958 kb on + strand at 5710.958 kb on + strand at 5710.958 kb on + strand at 5710.959 kb on - strand at 5710.959 kb on - strand at 5710.959 kb on - strand at 5710.959 kb on - strand at 5710.959 kb on - strand at 5710.972 kb on + strand at 5710.972 kb on + strand at 5710.973 kb on - strand at 5710.977 kb on + strand at 5710.977 kb on + strand at 5710.978 kb on - strand at 5710.978 kb on - strand at 5710.978 kb on - strand at 5711.031 kb on + strand at 5711.031 kb on + strand at 5711.032 kb on - strand at 5711.032 kb on - strand at 5711.051 kb on + strand at 5711.051 kb on + strand at 5711.051 kb on + strand at 5711.052 kb on - strand at 5711.255 kb on + strand at 5711.358 kb on + strand at 5711.358 kb on + strand at 5711.358 kb on + strand at 5711.359 kb on - strand at 5711.359 kb on - strand at 5711.359 kb on - strand at 5711.359 kb on - strand at 5711.359 kb on - strand at 5711.359 kb on - strand at 5711.359 kb on - strand at 5711.359 kb on - strand at 5711.362 kb on + strand at 5711.362 kb on + strand at 5711.362 kb on + strand at 5711.362 kb on + strand at 5711.362 kb on + strand at 5711.362 kb on + strand at 5711.362 kb on + strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.363 kb on - strand at 5711.461 kb on + strand, within Pf6N2E2_4955 at 5711.461 kb on + strand, within Pf6N2E2_4955 at 5711.462 kb on - strand, within Pf6N2E2_4955 at 5711.462 kb on - strand, within Pf6N2E2_4955 at 5711.752 kb on + strand, within Pf6N2E2_4955 at 5711.752 kb on + strand, within Pf6N2E2_4955 at 5711.752 kb on + strand, within Pf6N2E2_4955 at 5711.752 kb on + strand, within Pf6N2E2_4955 at 5711.755 kb on + strand, within Pf6N2E2_4955 at 5711.755 kb on + strand, within Pf6N2E2_4955 at 5711.755 kb on + strand, within Pf6N2E2_4955 at 5711.756 kb on - strand, within Pf6N2E2_4955 at 5711.756 kb on - strand, within Pf6N2E2_4955 at 5711.756 kb on - strand, within Pf6N2E2_4955 at 5711.817 kb on + strand at 5711.817 kb on + strand at 5711.817 kb on + strand at 5711.818 kb on - strand at 5711.818 kb on - strand at 5711.818 kb on - strand at 5711.818 kb on - strand at 5711.831 kb on + strand at 5711.831 kb on + strand at 5711.831 kb on + strand at 5711.831 kb on + strand at 5711.831 kb on + strand at 5711.832 kb on - strand at 5711.832 kb on - strand at 5711.832 kb on - strand at 5711.832 kb on - strand at 5711.832 kb on - strand at 5711.832 kb on - strand at 5711.832 kb on - strand at 5711.834 kb on - strand at 5711.834 kb on - strand at 5711.834 kb on - strand at 5711.834 kb on - strand at 5711.865 kb on + strand at 5711.872 kb on - strand at 5711.884 kb on + strand at 5711.884 kb on + strand at 5711.885 kb on - strand at 5711.911 kb on - strand at 5711.911 kb on - strand at 5711.911 kb on - strand at 5711.911 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 5,709,324 + Pf6N2E2_4953 0.45 +0.3 5,709,324 + Pf6N2E2_4953 0.45 -1.2 5,709,672 + Pf6N2E2_4953 0.65 +0.6 5,709,729 + Pf6N2E2_4953 0.68 -0.5 5,709,730 - Pf6N2E2_4953 0.68 -1.2 5,709,777 + Pf6N2E2_4953 0.71 -0.2 5,709,777 + Pf6N2E2_4953 0.71 +2.7 5,709,778 - Pf6N2E2_4953 0.71 +0.3 5,709,846 + Pf6N2E2_4953 0.75 -1.1 5,709,846 + Pf6N2E2_4953 0.75 +1.0 5,709,847 - Pf6N2E2_4953 0.75 -1.8 5,709,847 - Pf6N2E2_4953 0.75 -0.4 5,709,847 - Pf6N2E2_4953 0.75 +1.1 5,709,847 - Pf6N2E2_4953 0.75 -1.5 5,710,298 + -0.3 5,710,298 + -0.0 5,710,299 - +1.1 5,710,299 - +0.6 5,710,299 - -0.9 5,710,359 + -0.2 5,710,359 + -1.1 5,710,359 + +1.4 5,710,359 + -0.6 5,710,360 - Pf6N2E2_4954 0.10 -1.1 5,710,360 - Pf6N2E2_4954 0.10 +0.4 5,710,360 - Pf6N2E2_4954 0.10 +0.5 5,710,360 - Pf6N2E2_4954 0.10 +1.2 5,710,360 - Pf6N2E2_4954 0.10 -0.8 5,710,360 - Pf6N2E2_4954 0.10 +0.5 5,710,360 - Pf6N2E2_4954 0.10 +0.4 5,710,361 + Pf6N2E2_4954 0.10 +2.1 5,710,361 + Pf6N2E2_4954 0.10 -0.9 5,710,361 + Pf6N2E2_4954 0.10 +1.4 5,710,362 - Pf6N2E2_4954 0.10 +0.7 5,710,362 - Pf6N2E2_4954 0.10 +0.7 5,710,639 + Pf6N2E2_4954 0.55 +0.0 5,710,640 - Pf6N2E2_4954 0.55 -0.0 5,710,640 - Pf6N2E2_4954 0.55 +1.0 5,710,853 + Pf6N2E2_4954 0.89 +0.1 5,710,853 + Pf6N2E2_4954 0.89 -0.6 5,710,854 - Pf6N2E2_4954 0.89 +3.5 5,710,907 + -0.9 5,710,907 + -2.1 5,710,907 + -0.5 5,710,907 + -0.4 5,710,907 + -0.2 5,710,907 + +0.4 5,710,908 - -1.3 5,710,957 - +0.2 5,710,957 - -0.8 5,710,958 + +0.4 5,710,958 + -0.5 5,710,958 + +0.4 5,710,958 + +0.2 5,710,958 + +0.0 5,710,958 + -0.7 5,710,958 + +0.2 5,710,958 + -0.8 5,710,959 - +1.2 5,710,959 - +1.7 5,710,959 - -0.7 5,710,959 - +1.4 5,710,959 - +0.7 5,710,972 + +1.2 5,710,972 + +0.1 5,710,973 - +0.7 5,710,977 + -0.1 5,710,977 + -0.9 5,710,978 - +1.0 5,710,978 - +1.4 5,710,978 - -0.5 5,711,031 + +0.2 5,711,031 + -0.4 5,711,032 - -0.9 5,711,032 - -0.2 5,711,051 + +0.6 5,711,051 + -0.1 5,711,051 + -0.2 5,711,052 - +0.4 5,711,255 + +1.4 5,711,358 + +0.2 5,711,358 + +0.5 5,711,358 + -0.2 5,711,359 - +0.2 5,711,359 - -1.5 5,711,359 - -0.3 5,711,359 - +0.2 5,711,359 - -0.8 5,711,359 - +0.6 5,711,359 - +0.4 5,711,359 - -0.6 5,711,362 + +0.7 5,711,362 + +0.3 5,711,362 + -0.5 5,711,362 + -0.4 5,711,362 + -0.7 5,711,362 + -0.7 5,711,362 + +0.2 5,711,363 - -0.3 5,711,363 - +0.9 5,711,363 - +1.5 5,711,363 - +1.2 5,711,363 - +0.7 5,711,363 - -0.5 5,711,363 - -0.8 5,711,363 - -0.2 5,711,363 - -0.2 5,711,363 - -0.0 5,711,363 - +0.6 5,711,461 + Pf6N2E2_4955 0.18 +0.5 5,711,461 + Pf6N2E2_4955 0.18 -0.9 5,711,462 - Pf6N2E2_4955 0.19 +0.1 5,711,462 - Pf6N2E2_4955 0.19 -1.1 5,711,752 + Pf6N2E2_4955 0.82 -0.2 5,711,752 + Pf6N2E2_4955 0.82 -0.2 5,711,752 + Pf6N2E2_4955 0.82 +1.0 5,711,752 + Pf6N2E2_4955 0.82 +0.4 5,711,755 + Pf6N2E2_4955 0.82 -0.9 5,711,755 + Pf6N2E2_4955 0.82 +0.2 5,711,755 + Pf6N2E2_4955 0.82 -2.1 5,711,756 - Pf6N2E2_4955 0.83 -0.5 5,711,756 - Pf6N2E2_4955 0.83 +0.2 5,711,756 - Pf6N2E2_4955 0.83 +0.6 5,711,817 + -0.8 5,711,817 + -0.6 5,711,817 + -0.0 5,711,818 - +0.5 5,711,818 - +0.4 5,711,818 - +0.5 5,711,818 - -0.2 5,711,831 + -0.5 5,711,831 + +0.1 5,711,831 + +0.2 5,711,831 + -1.0 5,711,831 + +0.8 5,711,832 - -2.1 5,711,832 - +0.4 5,711,832 - +0.8 5,711,832 - +0.2 5,711,832 - +0.4 5,711,832 - +0.2 5,711,832 - -0.1 5,711,834 - +0.1 5,711,834 - -0.2 5,711,834 - -1.5 5,711,834 - +0.2 5,711,865 + -1.2 5,711,872 - +1.4 5,711,884 + -0.4 5,711,884 + -0.6 5,711,885 - +0.6 5,711,911 - -0.3 5,711,911 - +0.9 5,711,911 - +0.1 5,711,911 - +0.4
Or see this region's nucleotide sequence