Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4462 and Pf6N2E2_4463 are separated by 79 nucleotides Pf6N2E2_4463 and Pf6N2E2_4464 overlap by 1 nucleotides
Pf6N2E2_4462 - O-antigen acetylase, at 5,194,079 to 5,196,040
_4462
Pf6N2E2_4463 - 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-), at 5,196,120 to 5,197,586
_4463
Pf6N2E2_4464 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like, at 5,197,586 to 5,198,554
_4464
Position (kb) 5196
5197
5198 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5195.234 kb on + strand, within Pf6N2E2_4462 at 5195.234 kb on + strand, within Pf6N2E2_4462 at 5195.234 kb on + strand, within Pf6N2E2_4462 at 5195.234 kb on + strand, within Pf6N2E2_4462 at 5195.235 kb on - strand, within Pf6N2E2_4462 at 5195.235 kb on - strand, within Pf6N2E2_4462 at 5195.435 kb on + strand, within Pf6N2E2_4462 at 5195.435 kb on + strand, within Pf6N2E2_4462 at 5195.435 kb on + strand, within Pf6N2E2_4462 at 5195.436 kb on - strand, within Pf6N2E2_4462 at 5195.570 kb on + strand, within Pf6N2E2_4462 at 5195.570 kb on + strand, within Pf6N2E2_4462 at 5195.570 kb on + strand, within Pf6N2E2_4462 at 5195.570 kb on + strand, within Pf6N2E2_4462 at 5195.571 kb on - strand, within Pf6N2E2_4462 at 5195.576 kb on + strand, within Pf6N2E2_4462 at 5195.722 kb on - strand, within Pf6N2E2_4462 at 5195.943 kb on - strand at 5195.951 kb on + strand at 5195.952 kb on - strand at 5195.952 kb on - strand at 5195.952 kb on - strand at 5195.952 kb on - strand at 5195.952 kb on - strand at 5196.025 kb on + strand at 5196.026 kb on - strand at 5196.026 kb on - strand at 5196.026 kb on - strand at 5196.026 kb on - strand at 5196.093 kb on + strand at 5196.093 kb on + strand at 5196.093 kb on + strand at 5196.093 kb on + strand at 5196.093 kb on + strand at 5196.093 kb on + strand at 5196.093 kb on + strand at 5196.093 kb on + strand at 5197.573 kb on + strand at 5197.579 kb on + strand at 5197.594 kb on - strand at 5197.594 kb on - strand at 5197.670 kb on + strand at 5197.671 kb on - strand at 5197.848 kb on + strand, within Pf6N2E2_4464 at 5197.964 kb on + strand, within Pf6N2E2_4464 at 5198.292 kb on - strand, within Pf6N2E2_4464 at 5198.425 kb on - strand, within Pf6N2E2_4464 at 5198.441 kb on + strand, within Pf6N2E2_4464 at 5198.442 kb on - strand, within Pf6N2E2_4464 at 5198.468 kb on + strand at 5198.468 kb on + strand at 5198.468 kb on + strand at 5198.469 kb on - strand at 5198.548 kb on + strand at 5198.552 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 5,195,234 + Pf6N2E2_4462 0.59 -2.0 5,195,234 + Pf6N2E2_4462 0.59 +0.7 5,195,234 + Pf6N2E2_4462 0.59 -1.0 5,195,234 + Pf6N2E2_4462 0.59 +1.6 5,195,235 - Pf6N2E2_4462 0.59 +0.4 5,195,235 - Pf6N2E2_4462 0.59 +1.0 5,195,435 + Pf6N2E2_4462 0.69 -0.4 5,195,435 + Pf6N2E2_4462 0.69 -0.4 5,195,435 + Pf6N2E2_4462 0.69 -1.3 5,195,436 - Pf6N2E2_4462 0.69 +0.8 5,195,570 + Pf6N2E2_4462 0.76 +0.2 5,195,570 + Pf6N2E2_4462 0.76 -0.5 5,195,570 + Pf6N2E2_4462 0.76 -0.4 5,195,570 + Pf6N2E2_4462 0.76 +0.0 5,195,571 - Pf6N2E2_4462 0.76 -0.7 5,195,576 + Pf6N2E2_4462 0.76 -1.5 5,195,722 - Pf6N2E2_4462 0.84 -0.3 5,195,943 - -0.5 5,195,951 + -1.5 5,195,952 - +0.2 5,195,952 - +0.7 5,195,952 - -0.7 5,195,952 - +0.1 5,195,952 - +0.6 5,196,025 + -1.5 5,196,026 - -0.7 5,196,026 - -0.9 5,196,026 - -0.6 5,196,026 - +0.8 5,196,093 + -2.0 5,196,093 + +0.4 5,196,093 + -0.6 5,196,093 + -1.2 5,196,093 + +0.1 5,196,093 + -1.0 5,196,093 + +0.0 5,196,093 + -1.5 5,197,573 + -1.1 5,197,579 + -0.2 5,197,594 - +2.6 5,197,594 - +0.6 5,197,670 + -0.7 5,197,671 - -0.6 5,197,848 + Pf6N2E2_4464 0.27 -0.6 5,197,964 + Pf6N2E2_4464 0.39 +1.2 5,198,292 - Pf6N2E2_4464 0.73 +1.0 5,198,425 - Pf6N2E2_4464 0.87 +2.6 5,198,441 + Pf6N2E2_4464 0.88 +0.0 5,198,442 - Pf6N2E2_4464 0.88 +0.0 5,198,468 + +1.2 5,198,468 + +0.0 5,198,468 + -0.4 5,198,469 - -0.6 5,198,548 + -0.5 5,198,552 + +0.3
Or see this region's nucleotide sequence