Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2814 and Pf6N2E2_2815 are separated by 144 nucleotides Pf6N2E2_2815 and Pf6N2E2_2816 overlap by 1 nucleotides Pf6N2E2_2816 and Pf6N2E2_2817 are separated by 52 nucleotides Pf6N2E2_2817 and Pf6N2E2_2818 are separated by 155 nucleotides
Pf6N2E2_2814 - Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme, at 3,301,693 to 3,302,565
_2814
Pf6N2E2_2815 - Putative hemolysin, at 3,302,710 to 3,303,465
_2815
Pf6N2E2_2816 - 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51), at 3,303,465 to 3,304,259
_2816
Pf6N2E2_2817 - Acyl carrier protein phosphodiesterase (EC 3.1.4.14), at 3,304,312 to 3,304,896
_2817
Pf6N2E2_2818 - Transcriptional regulator, ArsR family, at 3,305,052 to 3,305,354
_2818
Position (kb)
3303
3304
3305 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3302.565 kb on + strand at 3302.565 kb on + strand at 3302.565 kb on + strand at 3302.566 kb on - strand at 3302.566 kb on - strand at 3302.566 kb on - strand at 3302.566 kb on - strand at 3302.589 kb on + strand at 3302.589 kb on + strand at 3302.589 kb on + strand at 3302.589 kb on + strand at 3302.589 kb on + strand at 3302.590 kb on - strand at 3302.590 kb on - strand at 3302.590 kb on - strand at 3302.590 kb on - strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.591 kb on + strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.592 kb on - strand at 3302.629 kb on + strand at 3302.629 kb on + strand at 3302.630 kb on - strand at 3302.630 kb on - strand at 3302.633 kb on + strand at 3302.634 kb on - strand at 3302.634 kb on - strand at 3302.634 kb on - strand at 3302.634 kb on - strand at 3302.661 kb on + strand at 3302.881 kb on + strand, within Pf6N2E2_2815 at 3302.881 kb on + strand, within Pf6N2E2_2815 at 3302.881 kb on + strand, within Pf6N2E2_2815 at 3302.881 kb on + strand, within Pf6N2E2_2815 at 3302.881 kb on + strand, within Pf6N2E2_2815 at 3302.882 kb on - strand, within Pf6N2E2_2815 at 3302.882 kb on - strand, within Pf6N2E2_2815 at 3302.882 kb on - strand, within Pf6N2E2_2815 at 3302.882 kb on - strand, within Pf6N2E2_2815 at 3302.882 kb on - strand, within Pf6N2E2_2815 at 3302.990 kb on - strand, within Pf6N2E2_2815 at 3303.057 kb on + strand, within Pf6N2E2_2815 at 3303.142 kb on + strand, within Pf6N2E2_2815 at 3303.148 kb on + strand, within Pf6N2E2_2815 at 3303.148 kb on + strand, within Pf6N2E2_2815 at 3303.148 kb on + strand, within Pf6N2E2_2815 at 3303.149 kb on - strand, within Pf6N2E2_2815 at 3303.149 kb on - strand, within Pf6N2E2_2815 at 3303.229 kb on + strand, within Pf6N2E2_2815 at 3303.229 kb on + strand, within Pf6N2E2_2815 at 3303.331 kb on + strand, within Pf6N2E2_2815 at 3303.332 kb on - strand, within Pf6N2E2_2815 at 3303.332 kb on - strand, within Pf6N2E2_2815 at 3303.437 kb on - strand at 3303.483 kb on + strand at 3303.484 kb on - strand at 3303.484 kb on - strand at 3303.502 kb on + strand at 3303.502 kb on + strand at 3303.503 kb on - strand at 3303.511 kb on + strand at 3303.512 kb on - strand at 3304.313 kb on + strand at 3304.313 kb on + strand at 3304.313 kb on + strand at 3304.313 kb on + strand at 3304.313 kb on + strand at 3304.313 kb on + strand at 3304.394 kb on + strand, within Pf6N2E2_2817 at 3304.394 kb on + strand, within Pf6N2E2_2817 at 3304.394 kb on + strand, within Pf6N2E2_2817 at 3304.395 kb on - strand, within Pf6N2E2_2817 at 3304.395 kb on - strand, within Pf6N2E2_2817 at 3304.526 kb on + strand, within Pf6N2E2_2817 at 3304.527 kb on - strand, within Pf6N2E2_2817 at 3304.527 kb on - strand, within Pf6N2E2_2817 at 3304.527 kb on - strand, within Pf6N2E2_2817 at 3304.527 kb on - strand, within Pf6N2E2_2817 at 3304.577 kb on - strand, within Pf6N2E2_2817 at 3304.623 kb on - strand, within Pf6N2E2_2817 at 3304.745 kb on + strand, within Pf6N2E2_2817 at 3304.745 kb on + strand, within Pf6N2E2_2817 at 3304.745 kb on + strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.746 kb on - strand, within Pf6N2E2_2817 at 3304.797 kb on - strand, within Pf6N2E2_2817 at 3304.889 kb on + strand at 3304.890 kb on - strand at 3304.890 kb on - strand at 3304.890 kb on - strand at 3304.909 kb on - strand at 3304.909 kb on - strand at 3304.909 kb on - strand at 3305.031 kb on + strand at 3305.032 kb on - strand at 3305.075 kb on - strand at 3305.077 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 3,302,565 + -0.2 3,302,565 + +0.4 3,302,565 + -0.6 3,302,566 - -0.7 3,302,566 - -1.2 3,302,566 - -2.0 3,302,566 - +0.5 3,302,589 + +0.8 3,302,589 + +0.6 3,302,589 + -0.2 3,302,589 + -0.4 3,302,589 + -0.4 3,302,590 - +0.3 3,302,590 - -0.6 3,302,590 - +0.7 3,302,590 - +0.0 3,302,591 + -0.8 3,302,591 + -1.2 3,302,591 + +0.3 3,302,591 + +0.5 3,302,591 + -1.3 3,302,591 + -0.8 3,302,591 + +0.2 3,302,591 + -0.8 3,302,591 + -0.0 3,302,591 + -1.4 3,302,591 + -0.6 3,302,591 + -0.8 3,302,591 + +1.0 3,302,592 - -2.3 3,302,592 - -0.3 3,302,592 - +0.2 3,302,592 - -2.2 3,302,592 - -1.2 3,302,592 - +0.7 3,302,592 - +0.2 3,302,592 - -2.7 3,302,592 - +0.4 3,302,592 - -2.0 3,302,592 - -1.3 3,302,592 - +0.5 3,302,592 - -0.5 3,302,629 + +0.2 3,302,629 + +1.8 3,302,630 - -0.9 3,302,630 - +1.2 3,302,633 + -1.2 3,302,634 - +2.5 3,302,634 - +0.2 3,302,634 - +0.4 3,302,634 - -0.8 3,302,661 + +2.0 3,302,881 + Pf6N2E2_2815 0.23 -1.4 3,302,881 + Pf6N2E2_2815 0.23 +0.3 3,302,881 + Pf6N2E2_2815 0.23 +0.1 3,302,881 + Pf6N2E2_2815 0.23 +0.1 3,302,881 + Pf6N2E2_2815 0.23 +0.2 3,302,882 - Pf6N2E2_2815 0.23 +1.2 3,302,882 - Pf6N2E2_2815 0.23 +1.2 3,302,882 - Pf6N2E2_2815 0.23 -1.3 3,302,882 - Pf6N2E2_2815 0.23 +2.2 3,302,882 - Pf6N2E2_2815 0.23 -1.2 3,302,990 - Pf6N2E2_2815 0.37 +1.2 3,303,057 + Pf6N2E2_2815 0.46 -0.5 3,303,142 + Pf6N2E2_2815 0.57 -0.8 3,303,148 + Pf6N2E2_2815 0.58 +1.2 3,303,148 + Pf6N2E2_2815 0.58 -0.6 3,303,148 + Pf6N2E2_2815 0.58 +0.4 3,303,149 - Pf6N2E2_2815 0.58 -0.1 3,303,149 - Pf6N2E2_2815 0.58 +0.2 3,303,229 + Pf6N2E2_2815 0.69 +1.2 3,303,229 + Pf6N2E2_2815 0.69 +1.2 3,303,331 + Pf6N2E2_2815 0.82 +1.2 3,303,332 - Pf6N2E2_2815 0.82 -1.6 3,303,332 - Pf6N2E2_2815 0.82 +0.8 3,303,437 - +0.7 3,303,483 + -0.3 3,303,484 - +0.3 3,303,484 - -0.6 3,303,502 + -1.8 3,303,502 + +1.3 3,303,503 - -0.4 3,303,511 + -0.0 3,303,512 - +0.7 3,304,313 + -1.3 3,304,313 + +0.7 3,304,313 + +0.2 3,304,313 + +0.8 3,304,313 + +0.0 3,304,313 + -1.4 3,304,394 + Pf6N2E2_2817 0.14 +1.4 3,304,394 + Pf6N2E2_2817 0.14 -0.0 3,304,394 + Pf6N2E2_2817 0.14 -0.3 3,304,395 - Pf6N2E2_2817 0.14 -0.3 3,304,395 - Pf6N2E2_2817 0.14 +0.2 3,304,526 + Pf6N2E2_2817 0.37 +0.0 3,304,527 - Pf6N2E2_2817 0.37 -0.4 3,304,527 - Pf6N2E2_2817 0.37 +0.4 3,304,527 - Pf6N2E2_2817 0.37 -0.8 3,304,527 - Pf6N2E2_2817 0.37 +0.9 3,304,577 - Pf6N2E2_2817 0.45 +0.4 3,304,623 - Pf6N2E2_2817 0.53 -0.7 3,304,745 + Pf6N2E2_2817 0.74 +0.5 3,304,745 + Pf6N2E2_2817 0.74 -0.1 3,304,745 + Pf6N2E2_2817 0.74 -1.0 3,304,746 - Pf6N2E2_2817 0.74 -0.3 3,304,746 - Pf6N2E2_2817 0.74 -0.6 3,304,746 - Pf6N2E2_2817 0.74 +0.2 3,304,746 - Pf6N2E2_2817 0.74 -1.2 3,304,746 - Pf6N2E2_2817 0.74 -0.3 3,304,746 - Pf6N2E2_2817 0.74 -0.6 3,304,746 - Pf6N2E2_2817 0.74 -0.4 3,304,746 - Pf6N2E2_2817 0.74 -0.4 3,304,746 - Pf6N2E2_2817 0.74 -0.5 3,304,797 - Pf6N2E2_2817 0.83 -0.3 3,304,889 + +0.1 3,304,890 - -0.4 3,304,890 - +0.5 3,304,890 - -0.5 3,304,909 - +0.8 3,304,909 - -1.4 3,304,909 - +0.9 3,305,031 + +1.4 3,305,032 - -0.4 3,305,075 - -0.6 3,305,077 + +0.2
Or see this region's nucleotide sequence