Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21410

Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21405 and BWI76_RS21410 are separated by 39 nucleotidesBWI76_RS21410 and BWI76_RS21415 are separated by 2 nucleotides BWI76_RS21405: BWI76_RS21405 - phosphatidylserine synthase, at 4,481,663 to 4,483,018 _RS21405 BWI76_RS21410: BWI76_RS21410 - lipoprotein, at 4,483,058 to 4,483,384 _RS21410 BWI76_RS21415: BWI76_RS21415 - MFS transporter, at 4,483,387 to 4,484,685 _RS21415 Position (kb) 4483 4484Strain fitness (log2 ratio) -2 -1 0 1at 4483.122 kb on - strand, within BWI76_RS21410at 4483.123 kb on + strand, within BWI76_RS21410at 4483.242 kb on - strand, within BWI76_RS21410at 4483.385 kb on + strandat 4483.574 kb on + strand, within BWI76_RS21415at 4483.647 kb on + strand, within BWI76_RS21415at 4483.757 kb on - strand, within BWI76_RS21415at 4483.902 kb on + strand, within BWI76_RS21415at 4483.910 kb on - strand, within BWI76_RS21415at 4483.976 kb on - strand, within BWI76_RS21415at 4484.062 kb on + strand, within BWI76_RS21415at 4484.247 kb on - strand, within BWI76_RS21415

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
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4,483,122 - BWI76_RS21410 0.20 -2.3
4,483,123 + BWI76_RS21410 0.20 -0.9
4,483,242 - BWI76_RS21410 0.56 -0.4
4,483,385 + -0.7
4,483,574 + BWI76_RS21415 0.14 -0.3
4,483,647 + BWI76_RS21415 0.20 -0.1
4,483,757 - BWI76_RS21415 0.28 +0.3
4,483,902 + BWI76_RS21415 0.40 +0.2
4,483,910 - BWI76_RS21415 0.40 +0.6
4,483,976 - BWI76_RS21415 0.45 -0.6
4,484,062 + BWI76_RS21415 0.52 +0.6
4,484,247 - BWI76_RS21415 0.66 +0.7

Or see this region's nucleotide sequence