Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21000
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,391,642 | + | BWI76_RS20995 | 0.67 | -0.2 | |
4,392,555 | - | BWI76_RS21000 | 0.16 | -1.1 | |
4,392,635 | + | BWI76_RS21000 | 0.21 | +0.2 | |
4,393,187 | - | BWI76_RS21000 | 0.57 | +1.4 | |
4,393,289 | + | BWI76_RS21000 | 0.63 | -2.9 | |
4,393,289 | + | BWI76_RS21000 | 0.63 | -0.6 | |
4,393,367 | + | BWI76_RS21000 | 0.68 | -1.0 | |
4,393,395 | + | BWI76_RS21000 | 0.70 | -0.4 | |
4,393,662 | - | BWI76_RS21000 | 0.87 | -1.1 | |
4,393,692 | - | BWI76_RS21000 | 0.89 | +0.5 | |
4,393,716 | + | +0.5 | |||
4,393,832 | + | +1.9 | |||
4,393,878 | - | -1.0 | |||
4,393,947 | - | -1.3 | |||
4,393,948 | - | +0.1 | |||
4,393,953 | - | -0.4 | |||
4,393,964 | - | -0.2 | |||
4,394,078 | + | -2.4 | |||
4,394,079 | - | -0.7 | |||
4,394,195 | - | BWI76_RS21005 | 0.14 | -0.1 | |
4,394,460 | + | BWI76_RS21005 | 0.25 | +0.9 | |
4,394,568 | - | BWI76_RS21005 | 0.30 | +0.5 | |
4,394,572 | + | BWI76_RS21005 | 0.30 | +0.5 | |
4,394,736 | - | BWI76_RS21005 | 0.38 | -0.1 | |
4,394,799 | - | BWI76_RS21005 | 0.41 | +0.4 | |
4,394,799 | - | BWI76_RS21005 | 0.41 | +0.2 | |
4,394,810 | + | BWI76_RS21005 | 0.41 | -1.0 |
Or see this region's nucleotide sequence