Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18915
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,922,490 | + | -1.4 | |||
3,922,503 | + | -2.5 | |||
3,922,586 | + | BWI76_RS18910 | 0.13 | -1.5 | |
3,922,673 | + | BWI76_RS18910 | 0.22 | +0.3 | |
3,922,681 | - | BWI76_RS18910 | 0.23 | -0.1 | |
3,922,683 | + | BWI76_RS18910 | 0.23 | -0.1 | |
3,922,696 | - | BWI76_RS18910 | 0.25 | +0.8 | |
3,922,899 | + | BWI76_RS18910 | 0.48 | +0.3 | |
3,923,095 | + | BWI76_RS18910 | 0.70 | -0.4 | |
3,923,263 | - | BWI76_RS18910 | 0.89 | -1.3 | |
3,923,456 | - | -0.3 | |||
3,923,834 | - | BWI76_RS18915 | 0.52 | -0.9 | |
3,924,034 | - | BWI76_RS18915 | 0.76 | -1.0 | |
3,924,265 | - | +1.2 | |||
3,924,265 | - | +0.1 | |||
3,924,265 | - | -0.0 | |||
3,924,568 | + | +0.1 | |||
3,924,568 | + | +0.4 | |||
3,924,578 | + | +0.4 | |||
3,924,586 | - | -0.2 | |||
3,924,586 | - | +0.9 | |||
3,924,586 | - | +0.5 | |||
3,924,698 | - | BWI76_RS18920 | 0.11 | -2.6 | |
3,924,720 | - | BWI76_RS18920 | 0.13 | -1.1 | |
3,924,867 | - | BWI76_RS18920 | 0.30 | -1.5 | |
3,925,011 | + | BWI76_RS18920 | 0.46 | -1.6 |
Or see this region's nucleotide sequence