Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14655 and BWI76_RS14660 overlap by 4 nucleotides
BWI76_RS14655: BWI76_RS14655 - FKBP-type peptidyl-prolyl isomerase domain-containing protein, at 3,077,746 to 3,079,032
_RS14655
BWI76_RS14660: BWI76_RS14660 - hypothetical protein, at 3,079,029 to 3,079,421
_RS14660
Position (kb)
3079
3080 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3078.041 kb on + strand at 3078.046 kb on + strand, within BWI76_RS14655 at 3078.046 kb on + strand, within BWI76_RS14655 at 3078.046 kb on + strand, within BWI76_RS14655 at 3078.046 kb on + strand, within BWI76_RS14655 at 3078.049 kb on - strand, within BWI76_RS14655 at 3078.054 kb on - strand, within BWI76_RS14655 at 3078.054 kb on - strand, within BWI76_RS14655 at 3078.160 kb on + strand, within BWI76_RS14655 at 3078.168 kb on - strand, within BWI76_RS14655 at 3078.170 kb on + strand, within BWI76_RS14655 at 3078.183 kb on - strand, within BWI76_RS14655 at 3078.184 kb on - strand, within BWI76_RS14655 at 3078.186 kb on + strand, within BWI76_RS14655 at 3078.193 kb on + strand, within BWI76_RS14655 at 3078.195 kb on + strand, within BWI76_RS14655 at 3078.195 kb on + strand, within BWI76_RS14655 at 3078.195 kb on + strand, within BWI76_RS14655 at 3078.197 kb on + strand, within BWI76_RS14655 at 3078.203 kb on - strand, within BWI76_RS14655 at 3078.213 kb on - strand, within BWI76_RS14655 at 3078.226 kb on - strand, within BWI76_RS14655 at 3078.262 kb on + strand, within BWI76_RS14655 at 3078.270 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand, within BWI76_RS14655 at 3078.305 kb on - strand at 3078.305 kb on - strand at 3078.356 kb on + strand, within BWI76_RS14655 at 3078.364 kb on - strand, within BWI76_RS14655 at 3078.364 kb on - strand, within BWI76_RS14655 at 3078.376 kb on - strand at 3078.829 kb on - strand at 3078.881 kb on + strand, within BWI76_RS14655 at 3078.889 kb on - strand, within BWI76_RS14655 at 3078.889 kb on - strand, within BWI76_RS14655 at 3078.943 kb on - strand at 3078.952 kb on + strand at 3078.960 kb on - strand at 3078.960 kb on - strand at 3079.044 kb on - strand at 3079.046 kb on + strand at 3079.046 kb on + strand at 3079.088 kb on + strand, within BWI76_RS14660 at 3079.511 kb on - strand at 3079.598 kb on + strand at 3079.601 kb on - strand at 3079.601 kb on - strand at 3079.603 kb on + strand at 3079.603 kb on + strand at 3079.603 kb on + strand at 3079.603 kb on + strand at 3079.606 kb on - strand at 3079.606 kb on - strand at 3079.606 kb on - strand at 3079.606 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.611 kb on - strand at 3079.619 kb on + strand at 3079.619 kb on + strand at 3079.620 kb on + strand at 3079.620 kb on + strand at 3079.625 kb on + strand at 3079.625 kb on + strand at 3079.626 kb on - strand at 3079.627 kb on - strand at 3079.627 kb on - strand at 3079.627 kb on - strand at 3079.633 kb on - strand at 3079.633 kb on - strand at 3079.633 kb on - strand at 3079.633 kb on - strand at 3079.645 kb on - strand at 3079.689 kb on + strand at 3079.692 kb on + strand at 3079.692 kb on + strand at 3079.696 kb on + strand at 3079.696 kb on + strand at 3079.704 kb on - strand at 3079.704 kb on - strand at 3079.704 kb on - strand at 3079.704 kb on - strand at 3079.704 kb on - strand at 3079.727 kb on + strand at 3079.727 kb on + strand at 3079.727 kb on + strand at 3079.727 kb on + strand at 3079.730 kb on - strand at 3079.735 kb on - strand at 3079.749 kb on + strand at 3079.757 kb on + strand at 3079.761 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.766 kb on + strand at 3079.773 kb on + strand at 3079.773 kb on + strand at 3079.774 kb on - strand at 3079.774 kb on - strand at 3079.774 kb on - strand at 3079.774 kb on - strand at 3079.774 kb on - strand at 3079.784 kb on + strand at 3079.784 kb on + strand at 3079.792 kb on - strand at 3079.792 kb on - strand at 3079.792 kb on - strand at 3079.800 kb on + strand at 3079.803 kb on - strand at 3079.803 kb on - strand at 3079.805 kb on + strand at 3079.834 kb on + strand at 3079.837 kb on - strand at 3079.838 kb on - strand at 3079.889 kb on + strand at 3079.889 kb on + strand at 3079.897 kb on - strand at 3080.046 kb on - strand at 3080.046 kb on - strand at 3080.063 kb on - strand at 3080.110 kb on + strand at 3080.115 kb on + strand at 3080.123 kb on - strand at 3080.166 kb on - strand at 3080.290 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL remove 3,078,041 + -1.3 3,078,046 + BWI76_RS14655 0.23 -1.6 3,078,046 + BWI76_RS14655 0.23 -0.0 3,078,046 + BWI76_RS14655 0.23 +1.3 3,078,046 + BWI76_RS14655 0.23 -1.8 3,078,049 - BWI76_RS14655 0.24 -0.5 3,078,054 - BWI76_RS14655 0.24 +0.2 3,078,054 - BWI76_RS14655 0.24 -1.3 3,078,160 + BWI76_RS14655 0.32 -0.1 3,078,168 - BWI76_RS14655 0.33 -0.0 3,078,170 + BWI76_RS14655 0.33 +0.5 3,078,183 - BWI76_RS14655 0.34 +0.6 3,078,184 - BWI76_RS14655 0.34 -2.2 3,078,186 + BWI76_RS14655 0.34 -2.7 3,078,193 + BWI76_RS14655 0.35 -0.0 3,078,195 + BWI76_RS14655 0.35 +0.4 3,078,195 + BWI76_RS14655 0.35 +0.8 3,078,195 + BWI76_RS14655 0.35 -1.6 3,078,197 + BWI76_RS14655 0.35 -1.0 3,078,203 - BWI76_RS14655 0.36 -0.6 3,078,213 - BWI76_RS14655 0.36 +1.6 3,078,226 - BWI76_RS14655 0.37 +0.6 3,078,262 + BWI76_RS14655 0.40 +1.7 3,078,270 - BWI76_RS14655 0.41 -1.0 3,078,305 - BWI76_RS14655 0.43 -0.9 3,078,305 - BWI76_RS14655 0.43 -1.0 3,078,305 - BWI76_RS14655 0.43 -1.6 3,078,305 - BWI76_RS14655 0.43 -0.0 3,078,305 - -1.0 3,078,305 - -1.3 3,078,356 + BWI76_RS14655 0.47 -0.2 3,078,364 - BWI76_RS14655 0.48 -3.1 3,078,364 - BWI76_RS14655 0.48 +1.0 3,078,376 - -0.6 3,078,829 - +1.0 3,078,881 + BWI76_RS14655 0.88 +0.6 3,078,889 - BWI76_RS14655 0.89 +1.0 3,078,889 - BWI76_RS14655 0.89 -2.3 3,078,943 - -2.0 3,078,952 + +0.3 3,078,960 - -1.0 3,078,960 - -2.0 3,079,044 - -1.0 3,079,046 + -0.4 3,079,046 + -1.6 3,079,088 + BWI76_RS14660 0.15 +1.0 3,079,511 - -2.6 3,079,598 + -0.6 3,079,601 - +0.8 3,079,601 - +0.8 3,079,603 + +0.2 3,079,603 + -1.3 3,079,603 + +0.4 3,079,603 + +1.6 3,079,606 - -0.5 3,079,606 - -0.5 3,079,606 - +0.4 3,079,606 - +0.2 3,079,611 - +0.1 3,079,611 - -0.4 3,079,611 - -0.0 3,079,611 - +0.5 3,079,611 - -0.1 3,079,611 - +0.5 3,079,611 - -1.0 3,079,619 + +1.0 3,079,619 + -1.8 3,079,620 + -0.7 3,079,620 + +0.1 3,079,625 + -1.8 3,079,625 + -0.3 3,079,626 - +0.2 3,079,627 - -0.6 3,079,627 - -1.6 3,079,627 - -0.0 3,079,633 - -0.2 3,079,633 - -0.2 3,079,633 - -1.0 3,079,633 - -0.5 3,079,645 - +0.4 3,079,689 + +0.3 3,079,692 + -3.1 3,079,692 + -0.7 3,079,696 + -2.5 3,079,696 + +0.0 3,079,704 - -0.4 3,079,704 - -0.0 3,079,704 - +0.1 3,079,704 - -0.3 3,079,704 - -1.6 3,079,727 + +0.4 3,079,727 + -0.4 3,079,727 + -1.0 3,079,727 + +0.8 3,079,730 - +0.4 3,079,735 - -0.3 3,079,749 + -0.4 3,079,757 + +0.3 3,079,761 + +0.1 3,079,766 + +0.8 3,079,766 + -0.5 3,079,766 + -0.3 3,079,766 + +1.5 3,079,766 + -1.1 3,079,766 + +0.5 3,079,766 + +1.4 3,079,766 + +0.6 3,079,773 + +0.1 3,079,773 + +0.8 3,079,774 - -0.2 3,079,774 - +1.4 3,079,774 - -2.2 3,079,774 - -0.6 3,079,774 - +1.0 3,079,784 + +2.2 3,079,784 + -2.0 3,079,792 - +0.3 3,079,792 - +0.5 3,079,792 - -0.0 3,079,800 + +0.3 3,079,803 - -2.1 3,079,803 - -0.0 3,079,805 + +0.4 3,079,834 + +0.2 3,079,837 - +0.7 3,079,838 - -1.6 3,079,889 + -0.3 3,079,889 + -0.3 3,079,897 - -1.8 3,080,046 - -1.0 3,080,046 - -0.0 3,080,063 - -0.0 3,080,110 + +1.3 3,080,115 + +0.3 3,080,123 - +2.6 3,080,166 - -1.0 3,080,290 - -0.2
Or see this region's nucleotide sequence