Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14645

Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14635 and BWI76_RS14640 are separated by 159 nucleotidesBWI76_RS14640 and BWI76_RS14645 overlap by 26 nucleotides BWI76_RS14635: BWI76_RS14635 - receptor, at 3,072,082 to 3,073,140 _RS14635 BWI76_RS14640: BWI76_RS14640 - DNA-binding response regulator, at 3,073,300 to 3,073,887 _RS14640 BWI76_RS14645: BWI76_RS14645 - sensor histidine kinase, at 3,073,862 to 3,075,619 _RS14645 Position (kb) 3073 3074 3075 3076Strain fitness (log2 ratio) -2 -1 0 1 2at 3073.115 kb on + strandat 3073.296 kb on - strandat 3074.168 kb on + strand, within BWI76_RS14645at 3074.449 kb on - strand, within BWI76_RS14645at 3074.506 kb on - strand, within BWI76_RS14645at 3074.506 kb on - strand, within BWI76_RS14645at 3074.506 kb on - strand, within BWI76_RS14645at 3074.533 kb on + strand, within BWI76_RS14645at 3074.541 kb on - strand, within BWI76_RS14645at 3075.053 kb on + strand, within BWI76_RS14645at 3075.150 kb on + strand, within BWI76_RS14645at 3075.167 kb on + strand, within BWI76_RS14645at 3075.571 kb on - strandat 3075.594 kb on + strandat 3075.594 kb on - strandat 3075.602 kb on - strandat 3075.833 kb on + strandat 3075.843 kb on + strandat 3075.909 kb on + strandat 3075.943 kb on + strandat 3076.097 kb on - strandat 3076.161 kb on + strandat 3076.185 kb on + strandat 3076.193 kb on - strandat 3076.217 kb on + strandat 3076.374 kb on - strandat 3076.390 kb on + strandat 3076.391 kb on + strandat 3076.408 kb on - strandat 3076.418 kb on - strandat 3076.458 kb on - strandat 3076.458 kb on - strandat 3076.458 kb on - strandat 3076.458 kb on - strandat 3076.463 kb on - strandat 3076.479 kb on - strandat 3076.498 kb on + strandat 3076.501 kb on + strandat 3076.506 kb on - strandat 3076.506 kb on - strandat 3076.506 kb on - strandat 3076.506 kb on - strandat 3076.506 kb on - strandat 3076.507 kb on - strandat 3076.509 kb on - strandat 3076.509 kb on - strandat 3076.514 kb on - strandat 3076.591 kb on - strandat 3076.609 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
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3,073,115 + -1.0
3,073,296 - +0.2
3,074,168 + BWI76_RS14645 0.17 -0.8
3,074,449 - BWI76_RS14645 0.33 -0.8
3,074,506 - BWI76_RS14645 0.37 +0.6
3,074,506 - BWI76_RS14645 0.37 +0.8
3,074,506 - BWI76_RS14645 0.37 +2.1
3,074,533 + BWI76_RS14645 0.38 -0.1
3,074,541 - BWI76_RS14645 0.39 -0.8
3,075,053 + BWI76_RS14645 0.68 -0.3
3,075,150 + BWI76_RS14645 0.73 -1.3
3,075,167 + BWI76_RS14645 0.74 +0.8
3,075,571 - -0.5
3,075,594 + -0.1
3,075,594 - +0.2
3,075,602 - +0.8
3,075,833 + -1.2
3,075,843 + +0.9
3,075,909 + +0.5
3,075,943 + -0.9
3,076,097 - +0.2
3,076,161 + +0.3
3,076,185 + +0.3
3,076,193 - +0.3
3,076,217 + -0.6
3,076,374 - +0.3
3,076,390 + +0.4
3,076,391 + -1.6
3,076,408 - -0.1
3,076,418 - +0.6
3,076,458 - +0.7
3,076,458 - +0.1
3,076,458 - -0.5
3,076,458 - -2.2
3,076,463 - -0.3
3,076,479 - -0.5
3,076,498 + -0.6
3,076,501 + +1.0
3,076,506 - -1.5
3,076,506 - -1.0
3,076,506 - -1.2
3,076,506 - -0.0
3,076,506 - -0.2
3,076,507 - -0.2
3,076,509 - -0.7
3,076,509 - -2.3
3,076,514 - -0.5
3,076,591 - -1.3
3,076,609 + -0.6

Or see this region's nucleotide sequence