Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11055
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,332,541 | + | BWI76_RS11050 | 0.13 | +0.2 | |
2,332,547 | - | BWI76_RS11050 | 0.13 | +2.5 | |
2,332,547 | - | BWI76_RS11050 | 0.13 | -1.4 | |
2,332,549 | - | BWI76_RS11050 | 0.14 | -0.5 | |
2,332,549 | - | BWI76_RS11050 | 0.14 | +0.1 | |
2,332,585 | + | BWI76_RS11050 | 0.17 | +0.1 | |
2,332,699 | + | BWI76_RS11050 | 0.29 | -1.7 | |
2,332,806 | + | BWI76_RS11050 | 0.39 | +0.3 | |
2,332,813 | + | BWI76_RS11050 | 0.40 | -0.9 | |
2,332,821 | - | BWI76_RS11050 | 0.41 | -0.7 | |
2,332,989 | - | BWI76_RS11050 | 0.58 | -1.1 | |
2,333,186 | - | BWI76_RS11050 | 0.78 | +0.2 | |
2,333,211 | - | BWI76_RS11050 | 0.80 | -2.2 | |
2,333,570 | + | BWI76_RS11055 | 0.13 | +0.3 | |
2,333,838 | + | BWI76_RS11055 | 0.36 | +0.5 | |
2,334,197 | + | BWI76_RS11055 | 0.68 | +0.6 | |
2,334,286 | - | BWI76_RS11055 | 0.75 | +1.4 | |
2,334,373 | - | BWI76_RS11055 | 0.83 | +0.3 | |
2,334,548 | - | -0.8 | |||
2,334,685 | + | +0.0 | |||
2,334,914 | - | BWI76_RS11060 | 0.27 | +0.0 | |
2,335,003 | - | +1.9 | |||
2,335,153 | + | BWI76_RS11060 | 0.68 | +0.4 |
Or see this region's nucleotide sequence