Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10590
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,234,855 | - | BWI76_RS10580 | 0.80 | +0.4 | |
2,235,150 | - | -0.7 | |||
2,235,161 | + | BWI76_RS10585 | 0.26 | +0.8 | |
2,235,391 | + | BWI76_RS10585 | 0.57 | -0.3 | |
2,235,650 | + | -0.4 | |||
2,235,709 | + | -0.7 | |||
2,235,765 | + | -0.3 | |||
2,236,016 | + | BWI76_RS10590 | 0.24 | +0.7 | |
2,236,465 | + | BWI76_RS10590 | 0.60 | +0.4 | |
2,236,477 | + | BWI76_RS10590 | 0.61 | +0.8 | |
2,236,631 | - | BWI76_RS10590 | 0.74 | +0.4 | |
2,236,775 | + | BWI76_RS10590 | 0.85 | +0.5 | |
2,236,775 | + | -2.1 | |||
2,236,797 | + | BWI76_RS10590 | 0.87 | +0.6 | |
2,236,818 | + | BWI76_RS10590 | 0.89 | +1.2 | |
2,236,818 | + | BWI76_RS10590 | 0.89 | +0.9 | |
2,236,873 | + | -0.1 | |||
2,236,960 | + | +0.9 | |||
2,237,139 | - | BWI76_RS10595 | 0.14 | +0.7 | |
2,237,192 | - | BWI76_RS10595 | 0.19 | +0.1 | |
2,237,402 | + | BWI76_RS10595 | 0.35 | -1.3 | |
2,237,518 | + | BWI76_RS10595 | 0.44 | +0.6 | |
2,237,603 | - | BWI76_RS10595 | 0.51 | +0.5 | |
2,237,660 | + | BWI76_RS10595 | 0.56 | +0.5 | |
2,237,826 | + | BWI76_RS10595 | 0.69 | -1.7 |
Or see this region's nucleotide sequence