Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6076 and Pf6N2E2_6077 are separated by 159 nucleotides Pf6N2E2_6077 and Pf6N2E2_6078 are separated by 45 nucleotides
Pf6N2E2_6076 - Transporter, LysE family, at 6,895,613 to 6,896,227
_6076
Pf6N2E2_6077 - Cysteine desulfurase (EC 2.8.1.7), at 6,896,387 to 6,897,553
_6077
Pf6N2E2_6078 - Xaa-Pro aminopeptidase (EC 3.4.11.9), at 6,897,599 to 6,899,407
_6078
Position (kb)
6896
6897
6898 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6895.397 kb on + strand at 6895.397 kb on + strand at 6895.398 kb on - strand at 6895.398 kb on - strand at 6895.420 kb on - strand at 6895.519 kb on - strand at 6895.753 kb on + strand, within Pf6N2E2_6076 at 6895.756 kb on + strand, within Pf6N2E2_6076 at 6895.756 kb on + strand, within Pf6N2E2_6076 at 6895.757 kb on - strand, within Pf6N2E2_6076 at 6895.820 kb on + strand, within Pf6N2E2_6076 at 6895.820 kb on + strand, within Pf6N2E2_6076 at 6895.820 kb on + strand, within Pf6N2E2_6076 at 6895.820 kb on + strand, within Pf6N2E2_6076 at 6895.820 kb on + strand, within Pf6N2E2_6076 at 6895.821 kb on - strand, within Pf6N2E2_6076 at 6895.821 kb on - strand, within Pf6N2E2_6076 at 6895.832 kb on + strand, within Pf6N2E2_6076 at 6895.832 kb on + strand, within Pf6N2E2_6076 at 6895.832 kb on + strand, within Pf6N2E2_6076 at 6895.832 kb on + strand, within Pf6N2E2_6076 at 6895.832 kb on + strand, within Pf6N2E2_6076 at 6895.832 kb on + strand, within Pf6N2E2_6076 at 6895.833 kb on - strand, within Pf6N2E2_6076 at 6895.833 kb on - strand, within Pf6N2E2_6076 at 6895.833 kb on - strand, within Pf6N2E2_6076 at 6895.863 kb on - strand, within Pf6N2E2_6076 at 6895.871 kb on + strand, within Pf6N2E2_6076 at 6895.871 kb on + strand, within Pf6N2E2_6076 at 6895.872 kb on - strand, within Pf6N2E2_6076 at 6895.930 kb on + strand, within Pf6N2E2_6076 at 6895.930 kb on + strand, within Pf6N2E2_6076 at 6895.931 kb on - strand, within Pf6N2E2_6076 at 6895.943 kb on + strand, within Pf6N2E2_6076 at 6895.943 kb on + strand, within Pf6N2E2_6076 at 6895.944 kb on - strand, within Pf6N2E2_6076 at 6896.015 kb on + strand, within Pf6N2E2_6076 at 6896.015 kb on + strand, within Pf6N2E2_6076 at 6896.015 kb on + strand, within Pf6N2E2_6076 at 6896.015 kb on + strand, within Pf6N2E2_6076 at 6896.015 kb on + strand, within Pf6N2E2_6076 at 6896.016 kb on - strand, within Pf6N2E2_6076 at 6896.016 kb on - strand, within Pf6N2E2_6076 at 6896.016 kb on - strand, within Pf6N2E2_6076 at 6896.016 kb on - strand, within Pf6N2E2_6076 at 6896.034 kb on - strand, within Pf6N2E2_6076 at 6896.042 kb on - strand, within Pf6N2E2_6076 at 6896.198 kb on + strand at 6896.198 kb on + strand at 6896.254 kb on + strand at 6896.326 kb on + strand at 6896.327 kb on - strand at 6896.332 kb on + strand at 6896.405 kb on + strand at 6896.405 kb on + strand at 6896.406 kb on - strand at 6897.011 kb on + strand, within Pf6N2E2_6077 at 6897.011 kb on + strand, within Pf6N2E2_6077 at 6897.011 kb on + strand, within Pf6N2E2_6077 at 6897.011 kb on + strand, within Pf6N2E2_6077 at 6897.012 kb on - strand, within Pf6N2E2_6077 at 6897.012 kb on - strand, within Pf6N2E2_6077 at 6897.038 kb on + strand, within Pf6N2E2_6077 at 6897.038 kb on + strand, within Pf6N2E2_6077 at 6897.038 kb on + strand, within Pf6N2E2_6077 at 6897.039 kb on - strand, within Pf6N2E2_6077 at 6897.253 kb on + strand, within Pf6N2E2_6077 at 6897.253 kb on + strand, within Pf6N2E2_6077 at 6897.253 kb on + strand, within Pf6N2E2_6077 at 6897.254 kb on - strand, within Pf6N2E2_6077 at 6897.254 kb on - strand, within Pf6N2E2_6077 at 6897.254 kb on - strand, within Pf6N2E2_6077 at 6897.254 kb on - strand, within Pf6N2E2_6077 at 6897.578 kb on + strand at 6897.578 kb on + strand at 6897.579 kb on - strand at 6897.781 kb on + strand, within Pf6N2E2_6078 at 6898.094 kb on + strand, within Pf6N2E2_6078 at 6898.094 kb on + strand, within Pf6N2E2_6078 at 6898.094 kb on + strand, within Pf6N2E2_6078 at 6898.095 kb on - strand, within Pf6N2E2_6078 at 6898.095 kb on - strand, within Pf6N2E2_6078 at 6898.095 kb on - strand, within Pf6N2E2_6078 at 6898.373 kb on + strand, within Pf6N2E2_6078 at 6898.374 kb on - strand, within Pf6N2E2_6078
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 6,895,397 + -0.5 6,895,397 + -1.0 6,895,398 - +0.4 6,895,398 - +0.1 6,895,420 - +0.8 6,895,519 - +0.6 6,895,753 + Pf6N2E2_6076 0.23 -0.6 6,895,756 + Pf6N2E2_6076 0.23 +0.3 6,895,756 + Pf6N2E2_6076 0.23 +0.3 6,895,757 - Pf6N2E2_6076 0.23 +1.0 6,895,820 + Pf6N2E2_6076 0.34 +1.0 6,895,820 + Pf6N2E2_6076 0.34 -1.0 6,895,820 + Pf6N2E2_6076 0.34 -0.1 6,895,820 + Pf6N2E2_6076 0.34 +0.6 6,895,820 + Pf6N2E2_6076 0.34 +0.1 6,895,821 - Pf6N2E2_6076 0.34 +0.6 6,895,821 - Pf6N2E2_6076 0.34 +1.0 6,895,832 + Pf6N2E2_6076 0.36 +0.4 6,895,832 + Pf6N2E2_6076 0.36 +0.7 6,895,832 + Pf6N2E2_6076 0.36 -2.1 6,895,832 + Pf6N2E2_6076 0.36 -0.1 6,895,832 + Pf6N2E2_6076 0.36 -1.0 6,895,832 + Pf6N2E2_6076 0.36 -0.5 6,895,833 - Pf6N2E2_6076 0.36 +0.7 6,895,833 - Pf6N2E2_6076 0.36 +0.8 6,895,833 - Pf6N2E2_6076 0.36 -0.4 6,895,863 - Pf6N2E2_6076 0.41 +0.0 6,895,871 + Pf6N2E2_6076 0.42 +1.0 6,895,871 + Pf6N2E2_6076 0.42 -2.0 6,895,872 - Pf6N2E2_6076 0.42 +0.8 6,895,930 + Pf6N2E2_6076 0.52 +0.2 6,895,930 + Pf6N2E2_6076 0.52 -0.0 6,895,931 - Pf6N2E2_6076 0.52 +0.5 6,895,943 + Pf6N2E2_6076 0.54 -0.0 6,895,943 + Pf6N2E2_6076 0.54 -0.0 6,895,944 - Pf6N2E2_6076 0.54 -1.3 6,896,015 + Pf6N2E2_6076 0.65 -2.5 6,896,015 + Pf6N2E2_6076 0.65 +0.1 6,896,015 + Pf6N2E2_6076 0.65 -0.8 6,896,015 + Pf6N2E2_6076 0.65 -0.4 6,896,015 + Pf6N2E2_6076 0.65 -1.2 6,896,016 - Pf6N2E2_6076 0.66 -0.6 6,896,016 - Pf6N2E2_6076 0.66 +1.0 6,896,016 - Pf6N2E2_6076 0.66 -0.0 6,896,016 - Pf6N2E2_6076 0.66 +0.4 6,896,034 - Pf6N2E2_6076 0.68 -2.0 6,896,042 - Pf6N2E2_6076 0.70 +1.0 6,896,198 + -0.4 6,896,198 + -2.2 6,896,254 + -0.2 6,896,326 + -0.5 6,896,327 - +0.1 6,896,332 + -1.9 6,896,405 + +1.3 6,896,405 + -0.3 6,896,406 - +1.5 6,897,011 + Pf6N2E2_6077 0.53 +1.2 6,897,011 + Pf6N2E2_6077 0.53 +1.6 6,897,011 + Pf6N2E2_6077 0.53 +0.8 6,897,011 + Pf6N2E2_6077 0.53 +0.6 6,897,012 - Pf6N2E2_6077 0.54 +0.2 6,897,012 - Pf6N2E2_6077 0.54 +1.1 6,897,038 + Pf6N2E2_6077 0.56 +1.0 6,897,038 + Pf6N2E2_6077 0.56 +1.0 6,897,038 + Pf6N2E2_6077 0.56 +0.3 6,897,039 - Pf6N2E2_6077 0.56 +0.3 6,897,253 + Pf6N2E2_6077 0.74 +0.1 6,897,253 + Pf6N2E2_6077 0.74 +2.0 6,897,253 + Pf6N2E2_6077 0.74 +0.9 6,897,254 - Pf6N2E2_6077 0.74 +0.3 6,897,254 - Pf6N2E2_6077 0.74 +0.8 6,897,254 - Pf6N2E2_6077 0.74 +1.7 6,897,254 - Pf6N2E2_6077 0.74 +1.5 6,897,578 + +0.4 6,897,578 + +0.2 6,897,579 - +0.3 6,897,781 + Pf6N2E2_6078 0.10 -0.5 6,898,094 + Pf6N2E2_6078 0.27 +2.4 6,898,094 + Pf6N2E2_6078 0.27 +2.0 6,898,094 + Pf6N2E2_6078 0.27 +0.2 6,898,095 - Pf6N2E2_6078 0.27 +0.2 6,898,095 - Pf6N2E2_6078 0.27 +2.0 6,898,095 - Pf6N2E2_6078 0.27 +0.7 6,898,373 + Pf6N2E2_6078 0.43 -0.3 6,898,374 - Pf6N2E2_6078 0.43 +0.5
Or see this region's nucleotide sequence