Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2475 and Pf6N2E2_2476 are separated by 56 nucleotides Pf6N2E2_2476 and Pf6N2E2_2477 are separated by 10 nucleotides Pf6N2E2_2477 and Pf6N2E2_2478 overlap by 1 nucleotides
Pf6N2E2_2475 - FIG00953861: hypothetical protein, at 2,921,994 to 2,922,287
_2475
Pf6N2E2_2476 - Arylesterase precursor (EC 3.1.1.2), at 2,922,344 to 2,922,949
_2476
Pf6N2E2_2477 - ABC transporter ATP-binding protein YvcR, at 2,922,960 to 2,923,643
_2477
Pf6N2E2_2478 - FIG00809136: hypothetical protein, at 2,923,643 to 2,926,147
_2478
Position (kb)
2922
2923
2924 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2921.996 kb on - strand at 2921.996 kb on - strand at 2921.996 kb on - strand at 2922.372 kb on - strand at 2922.372 kb on - strand at 2922.372 kb on - strand at 2922.507 kb on + strand, within Pf6N2E2_2476 at 2922.508 kb on - strand, within Pf6N2E2_2476 at 2922.532 kb on - strand, within Pf6N2E2_2476 at 2922.543 kb on + strand, within Pf6N2E2_2476 at 2922.775 kb on + strand, within Pf6N2E2_2476 at 2922.859 kb on + strand, within Pf6N2E2_2476 at 2922.860 kb on - strand, within Pf6N2E2_2476 at 2922.884 kb on - strand, within Pf6N2E2_2476 at 2922.992 kb on + strand at 2923.181 kb on + strand, within Pf6N2E2_2477 at 2923.181 kb on + strand, within Pf6N2E2_2477 at 2923.597 kb on + strand at 2923.762 kb on + strand at 2923.776 kb on - strand at 2924.171 kb on + strand, within Pf6N2E2_2478 at 2924.172 kb on - strand, within Pf6N2E2_2478 at 2924.172 kb on - strand, within Pf6N2E2_2478 at 2924.172 kb on - strand, within Pf6N2E2_2478 at 2924.172 kb on - strand, within Pf6N2E2_2478 at 2924.172 kb on - strand, within Pf6N2E2_2478 at 2924.198 kb on + strand, within Pf6N2E2_2478 at 2924.279 kb on + strand, within Pf6N2E2_2478 at 2924.423 kb on + strand, within Pf6N2E2_2478 at 2924.606 kb on - strand, within Pf6N2E2_2478
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 2,921,996 - -1.3 2,921,996 - -0.2 2,921,996 - +2.0 2,922,372 - -0.2 2,922,372 - -0.2 2,922,372 - -0.1 2,922,507 + Pf6N2E2_2476 0.27 -1.0 2,922,508 - Pf6N2E2_2476 0.27 -0.1 2,922,532 - Pf6N2E2_2476 0.31 +0.5 2,922,543 + Pf6N2E2_2476 0.33 -1.9 2,922,775 + Pf6N2E2_2476 0.71 +1.4 2,922,859 + Pf6N2E2_2476 0.85 +1.0 2,922,860 - Pf6N2E2_2476 0.85 +0.1 2,922,884 - Pf6N2E2_2476 0.89 -0.2 2,922,992 + -0.3 2,923,181 + Pf6N2E2_2477 0.32 -0.4 2,923,181 + Pf6N2E2_2477 0.32 -1.8 2,923,597 + -0.0 2,923,762 + +0.3 2,923,776 - -0.7 2,924,171 + Pf6N2E2_2478 0.21 -0.6 2,924,172 - Pf6N2E2_2478 0.21 -0.1 2,924,172 - Pf6N2E2_2478 0.21 +0.6 2,924,172 - Pf6N2E2_2478 0.21 +1.1 2,924,172 - Pf6N2E2_2478 0.21 -1.7 2,924,172 - Pf6N2E2_2478 0.21 +0.0 2,924,198 + Pf6N2E2_2478 0.22 -0.7 2,924,279 + Pf6N2E2_2478 0.25 +0.6 2,924,423 + Pf6N2E2_2478 0.31 +1.2 2,924,606 - Pf6N2E2_2478 0.38 +0.9
Or see this region's nucleotide sequence