Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19170

Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
3,988,548	+		BWI76_RS19165	0.48	-0.3
3,988,651	+		BWI76_RS19165	0.63	+0.1
3,988,712	-		BWI76_RS19165	0.71	-1.2
3,988,729	-		BWI76_RS19165	0.74	-0.6
3,988,745	-		BWI76_RS19165	0.76	-0.6
3,988,777	+		BWI76_RS19165	0.81	-0.0
3,988,865	-				+0.5
3,988,906	+				-0.8
3,988,914	-				+0.3
3,988,914	-				+0.7
3,988,949	+				+0.4
3,988,957	-				+0.3
3,989,082	+				+0.6
3,989,090	-				-0.8
3,989,104	+				-1.1
3,989,104	+				+0.0
3,989,108	-				-1.7
3,989,123	+				+0.1
3,989,172	+				+1.6
3,989,172	+				-0.8
3,989,172	+				-0.5
3,989,172	+				+0.3
3,989,180	-				+0.1
3,989,180	-				-0.1
3,989,180	-				-0.4
3,989,180	-				+0.0
3,989,198	+				-0.5
3,989,282	-				+0.3
3,989,294	+				-0.1
3,989,319	-				-0.3
3,989,343	+				-0.5
3,989,344	-				-0.9
3,989,344	-				-0.8
3,989,351	-				+1.3
3,989,351	-				-1.1
3,989,472	-				+0.8
3,989,479	+				+0.4
3,989,481	-				+1.0
3,989,484	+				-0.2
3,989,487	-				-2.0
3,989,491	+				+0.1
3,989,492	-				-0.5
3,989,504	-				-0.3
3,989,504	-				+0.3
3,989,504	-				+0.3
3,989,585	-				+0.2
3,989,594	-		BWI76_RS19170	0.11	-0.8
3,989,600	-		BWI76_RS19170	0.12	-0.7
3,989,687	-		BWI76_RS19170	0.26	-0.4
3,989,695	-		BWI76_RS19170	0.27	+1.3
3,989,708	-		BWI76_RS19170	0.29	-0.8
3,989,710	+		BWI76_RS19170	0.29	-1.4
3,989,710	+		BWI76_RS19170	0.29	-2.1
3,989,718	-		BWI76_RS19170	0.31	-0.5
3,989,718	-		BWI76_RS19170	0.31	-0.2
3,989,718	-		BWI76_RS19170	0.31	-0.1
3,989,721	+		BWI76_RS19170	0.31	-2.0
3,989,729	-		BWI76_RS19170	0.33	-2.8
3,989,729	-		BWI76_RS19170	0.33	+1.5
3,989,731	-		BWI76_RS19170	0.33	-1.8
3,989,756	+		BWI76_RS19170	0.37	-0.9
3,989,764	-		BWI76_RS19170	0.38	+0.1
3,989,764	-		BWI76_RS19170	0.38	-0.2
3,989,764	-		BWI76_RS19170	0.38	-0.6
3,989,766	+		BWI76_RS19170	0.39	-0.1
3,989,766	+		BWI76_RS19170	0.39	-1.0
3,989,766	+				+0.7
3,989,766	+		BWI76_RS19170	0.39	-0.6
3,989,766	+		BWI76_RS19170	0.39	-0.8
3,989,766	+		BWI76_RS19170	0.39	-1.5
3,989,766	+		BWI76_RS19170	0.39	+0.0
3,989,766	+		BWI76_RS19170	0.39	+0.3
3,989,766	+		BWI76_RS19170	0.39	-1.4
3,989,766	+		BWI76_RS19170	0.39	-0.5
3,989,766	+		BWI76_RS19170	0.39	-4.0
3,989,766	+		BWI76_RS19170	0.39	+0.8
3,989,766	+		BWI76_RS19170	0.39	-0.2
3,989,766	+		BWI76_RS19170	0.39	+0.1
3,989,769	+		BWI76_RS19170	0.39	-3.4
3,989,769	-		BWI76_RS19170	0.39	-1.3
3,989,774	-		BWI76_RS19170	0.40	+0.9
3,989,774	-		BWI76_RS19170	0.40	-1.1
3,989,774	-		BWI76_RS19170	0.40	+1.0
3,989,774	-		BWI76_RS19170	0.40	-1.6
3,989,774	-		BWI76_RS19170	0.40	-0.2
3,989,774	-		BWI76_RS19170	0.40	+0.5
3,989,774	-		BWI76_RS19170	0.40	+0.6
3,989,774	-		BWI76_RS19170	0.40	+0.0
3,989,814	-		BWI76_RS19170	0.46	+1.3
3,989,815	-		BWI76_RS19170	0.46	-2.5
3,989,914	-				+0.8
3,989,914	-		BWI76_RS19170	0.62	+3.4
3,989,919	-		BWI76_RS19170	0.63	+0.1
3,989,937	-		BWI76_RS19170	0.66	+0.2
3,989,937	-		BWI76_RS19170	0.66	-1.9
3,989,945	-		BWI76_RS19170	0.67	+0.1
3,989,945	-		BWI76_RS19170	0.67	-1.2
3,989,945	-		BWI76_RS19170	0.67	-1.9
3,989,959	+		BWI76_RS19170	0.70	+0.0
3,990,036	-		BWI76_RS19170	0.82	-0.3
3,990,036	-		BWI76_RS19170	0.82	+0.1
3,990,134	-				-0.0
3,990,141	+				+0.8
3,990,148	-				+0.0
3,990,149	-				-2.2
3,990,240	+				+0.4
3,990,254	+				+0.8
3,990,257	-				+0.5
3,990,262	+				+0.2
3,990,268	-				+0.1
3,990,270	-				-0.1
3,990,274	+				+0.3
3,990,327	+				-0.8
3,990,355	+				-1.5
3,990,378	+				+0.8
3,990,382	-				+0.0
3,990,399	+				+0.8
3,990,399	+				+0.5
3,990,407	-				-0.2
3,990,407	-				+0.4
3,990,407	-				+1.0
3,990,407	-				+0.9
3,990,423	+				+0.4
3,990,423	+				+0.2
3,990,430	-				-1.0
3,990,430	-				+0.6
3,990,476	+				+0.8
3,990,536	+				-0.3
3,990,590	-				+0.8
3,990,600	+		BWI76_RS19175	0.12	-1.1
3,990,638	+		BWI76_RS19175	0.15	+0.4
3,990,792	-		BWI76_RS19175	0.27	+0.1
3,990,792	-		BWI76_RS19175	0.27	-0.3
3,990,797	-		BWI76_RS19175	0.28	-0.2
3,990,804	+		BWI76_RS19175	0.28	+0.1
3,990,804	+		BWI76_RS19175	0.28	+0.4
3,990,804	+		BWI76_RS19175	0.28	-2.2
3,990,812	-		BWI76_RS19175	0.29	+0.1
3,990,812	-		BWI76_RS19175	0.29	+0.1
3,990,874	+		BWI76_RS19175	0.34	+0.2
3,990,881	-		BWI76_RS19175	0.34	+0.4
3,990,978	+		BWI76_RS19175	0.42	-0.4
3,990,986	-		BWI76_RS19175	0.42	+0.8
3,991,052	+		BWI76_RS19175	0.48	+0.8