Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12680
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,642,454 | + | BWI76_RS12675 | 0.32 | +0.5 | |
| 2,642,489 | - | BWI76_RS12675 | 0.35 | -1.2 | |
| 2,642,650 | + | BWI76_RS12675 | 0.48 | -0.2 | |
| 2,642,739 | + | BWI76_RS12675 | 0.55 | -0.5 | |
| 2,642,744 | + | BWI76_RS12675 | 0.55 | -0.4 | |
| 2,642,760 | + | BWI76_RS12675 | 0.56 | -0.1 | |
| 2,642,930 | - | BWI76_RS12675 | 0.70 | +1.1 | |
| 2,643,057 | - | BWI76_RS12675 | 0.80 | -0.2 | |
| 2,643,131 | + | BWI76_RS12675 | 0.86 | +0.2 | |
| 2,643,212 | - | -0.6 | |||
| 2,643,232 | - | +0.2 | |||
| 2,643,366 | - | +0.1 | |||
| 2,643,645 | + | BWI76_RS12680 | 0.27 | +0.8 | |
| 2,643,766 | + | BWI76_RS12680 | 0.38 | +0.4 | |
| 2,644,397 | + | +0.1 | |||
| 2,644,521 | - | BWI76_RS12685 | 0.10 | +0.4 | |
| 2,645,307 | + | -0.9 | |||
| 2,645,348 | + | -0.3 | |||
| 2,645,362 | + | -2.5 | |||
| 2,645,362 | - | -1.7 | |||
| 2,645,370 | - | +1.0 | |||
| 2,645,370 | - | -1.7 | |||
| 2,645,370 | - | -1.6 | |||
| 2,645,386 | + | -0.1 | |||
| 2,645,394 | - | +1.6 | |||
| 2,645,394 | - | +0.9 | |||
| 2,645,394 | - | -0.1 | |||
| 2,645,394 | - | -1.7 | |||
| 2,645,394 | - | -0.1 | |||
| 2,645,394 | - | -2.1 | |||
| 2,645,394 | - | -0.6 | |||
| 2,645,394 | - | -0.7 | |||
| 2,645,404 | - | +0.4 |
Or see this region's nucleotide sequence