Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5784 and Pf6N2E2_5785 are separated by 222 nucleotides Pf6N2E2_5785 and Pf6N2E2_5786 are separated by 46 nucleotides
Pf6N2E2_5784 - FIG01073969: hypothetical protein, at 6,603,002 to 6,603,790
_5784
Pf6N2E2_5785 - Phosphoserine phosphatase (EC 3.1.3.3), at 6,604,013 to 6,604,666
_5785
Pf6N2E2_5786 - ABC transporter, ATP-binding protein, at 6,604,713 to 6,605,702
_5786
Position (kb)
6604
6605 Strain fitness (log2 ratio)
-2
-1
0
1 at 6603.054 kb on + strand at 6603.055 kb on - strand at 6603.055 kb on - strand at 6603.345 kb on - strand, within Pf6N2E2_5784 at 6603.431 kb on + strand, within Pf6N2E2_5784 at 6603.433 kb on + strand, within Pf6N2E2_5784 at 6603.434 kb on - strand, within Pf6N2E2_5784 at 6603.434 kb on - strand, within Pf6N2E2_5784 at 6603.434 kb on - strand, within Pf6N2E2_5784 at 6603.482 kb on + strand, within Pf6N2E2_5784 at 6603.482 kb on + strand, within Pf6N2E2_5784 at 6603.483 kb on - strand, within Pf6N2E2_5784 at 6603.551 kb on + strand, within Pf6N2E2_5784 at 6603.551 kb on + strand, within Pf6N2E2_5784 at 6603.552 kb on - strand, within Pf6N2E2_5784 at 6603.813 kb on + strand at 6603.813 kb on + strand at 6603.827 kb on + strand at 6604.024 kb on + strand at 6604.025 kb on - strand at 6604.025 kb on - strand at 6604.138 kb on - strand, within Pf6N2E2_5785 at 6604.242 kb on + strand, within Pf6N2E2_5785 at 6604.243 kb on - strand, within Pf6N2E2_5785 at 6604.497 kb on + strand, within Pf6N2E2_5785 at 6604.719 kb on + strand at 6604.720 kb on - strand at 6604.800 kb on + strand at 6604.800 kb on + strand at 6604.800 kb on + strand at 6604.800 kb on + strand at 6604.801 kb on - strand at 6604.801 kb on - strand at 6604.993 kb on + strand, within Pf6N2E2_5786 at 6604.993 kb on + strand, within Pf6N2E2_5786 at 6604.993 kb on + strand, within Pf6N2E2_5786 at 6604.994 kb on - strand, within Pf6N2E2_5786 at 6604.994 kb on - strand, within Pf6N2E2_5786 at 6604.994 kb on - strand, within Pf6N2E2_5786 at 6604.994 kb on - strand, within Pf6N2E2_5786 at 6604.994 kb on - strand, within Pf6N2E2_5786 at 6605.038 kb on + strand, within Pf6N2E2_5786 at 6605.038 kb on + strand, within Pf6N2E2_5786 at 6605.039 kb on - strand, within Pf6N2E2_5786 at 6605.064 kb on + strand, within Pf6N2E2_5786 at 6605.065 kb on - strand, within Pf6N2E2_5786 at 6605.452 kb on + strand, within Pf6N2E2_5786 at 6605.452 kb on + strand, within Pf6N2E2_5786 at 6605.453 kb on - strand, within Pf6N2E2_5786 at 6605.453 kb on - strand, within Pf6N2E2_5786 at 6605.453 kb on - strand, within Pf6N2E2_5786
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 6,603,054 + +0.1 6,603,055 - -0.2 6,603,055 - +0.1 6,603,345 - Pf6N2E2_5784 0.43 +0.8 6,603,431 + Pf6N2E2_5784 0.54 -0.2 6,603,433 + Pf6N2E2_5784 0.55 -0.6 6,603,434 - Pf6N2E2_5784 0.55 -0.6 6,603,434 - Pf6N2E2_5784 0.55 -1.5 6,603,434 - Pf6N2E2_5784 0.55 -0.6 6,603,482 + Pf6N2E2_5784 0.61 +0.8 6,603,482 + Pf6N2E2_5784 0.61 +0.3 6,603,483 - Pf6N2E2_5784 0.61 -0.2 6,603,551 + Pf6N2E2_5784 0.70 -0.9 6,603,551 + Pf6N2E2_5784 0.70 +0.8 6,603,552 - Pf6N2E2_5784 0.70 +0.5 6,603,813 + +0.4 6,603,813 + -0.1 6,603,827 + -0.1 6,604,024 + -1.0 6,604,025 - -0.5 6,604,025 - -1.5 6,604,138 - Pf6N2E2_5785 0.19 -0.8 6,604,242 + Pf6N2E2_5785 0.35 -2.0 6,604,243 - Pf6N2E2_5785 0.35 +0.8 6,604,497 + Pf6N2E2_5785 0.74 -2.5 6,604,719 + +1.0 6,604,720 - +1.0 6,604,800 + +0.8 6,604,800 + +0.4 6,604,800 + +1.5 6,604,800 + +0.8 6,604,801 - +0.4 6,604,801 - +0.8 6,604,993 + Pf6N2E2_5786 0.28 -0.3 6,604,993 + Pf6N2E2_5786 0.28 +0.7 6,604,993 + Pf6N2E2_5786 0.28 -0.1 6,604,994 - Pf6N2E2_5786 0.28 -0.0 6,604,994 - Pf6N2E2_5786 0.28 -0.8 6,604,994 - Pf6N2E2_5786 0.28 -0.0 6,604,994 - Pf6N2E2_5786 0.28 -0.8 6,604,994 - Pf6N2E2_5786 0.28 -0.6 6,605,038 + Pf6N2E2_5786 0.33 -0.6 6,605,038 + Pf6N2E2_5786 0.33 +1.2 6,605,039 - Pf6N2E2_5786 0.33 +0.4 6,605,064 + Pf6N2E2_5786 0.35 -0.4 6,605,065 - Pf6N2E2_5786 0.36 +0.5 6,605,452 + Pf6N2E2_5786 0.75 -0.2 6,605,452 + Pf6N2E2_5786 0.75 +0.0 6,605,453 - Pf6N2E2_5786 0.75 +0.2 6,605,453 - Pf6N2E2_5786 0.75 +0.8 6,605,453 - Pf6N2E2_5786 0.75 -0.8
Or see this region's nucleotide sequence