Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26205
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 5,420,112 | - | BWI76_RS26200 | 0.46 | -0.8 | |
| 5,420,273 | - | BWI76_RS26200 | 0.57 | -0.3 | |
| 5,420,275 | + | BWI76_RS26200 | 0.57 | -4.1 | |
| 5,420,280 | + | BWI76_RS26200 | 0.58 | -1.6 | |
| 5,420,283 | - | BWI76_RS26200 | 0.58 | -0.9 | |
| 5,420,578 | + | BWI76_RS26200 | 0.78 | -2.8 | |
| 5,420,670 | - | BWI76_RS26200 | 0.85 | +1.2 | |
| 5,420,724 | - | BWI76_RS26200 | 0.88 | -2.0 | |
| 5,420,852 | + | +0.4 | |||
| 5,420,869 | - | -0.6 | |||
| 5,420,896 | + | +0.9 | |||
| 5,420,904 | - | +0.3 | |||
| 5,421,000 | + | -2.2 | |||
| 5,421,506 | - | BWI76_RS26205 | 0.48 | +0.3 | |
| 5,421,640 | + | BWI76_RS26205 | 0.58 | +0.5 | |
| 5,421,648 | - | BWI76_RS26205 | 0.59 | +0.7 | |
| 5,421,946 | + | BWI76_RS26205 | 0.82 | -1.2 | |
| 5,422,013 | + | BWI76_RS26205 | 0.87 | -1.2 | |
| 5,422,099 | - | -0.3 | |||
| 5,422,263 | - | +0.4 | |||
| 5,422,333 | - | -1.6 | |||
| 5,422,360 | + | +0.6 | |||
| 5,422,373 | + | +0.2 | |||
| 5,422,381 | - | +1.2 | |||
| 5,422,462 | - | BWI76_RS26210 | 0.10 | -4.0 | |
| 5,422,483 | + | BWI76_RS26210 | 0.11 | -2.0 | |
| 5,422,516 | + | BWI76_RS26210 | 0.13 | -1.6 | |
| 5,422,864 | - | BWI76_RS26210 | 0.30 | -2.4 | |
| 5,422,910 | - | BWI76_RS26210 | 0.33 | -1.1 | |
| 5,422,985 | + | BWI76_RS26210 | 0.36 | +0.3 |
Or see this region's nucleotide sequence