Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25560
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
5,311,003 | + | BWI76_RS25555 | 0.35 | -0.6 | |
5,311,285 | - | BWI76_RS25555 | 0.67 | +0.3 | |
5,311,339 | + | BWI76_RS25555 | 0.73 | +0.5 | |
5,311,469 | + | BWI76_RS25555 | 0.87 | +0.3 | |
5,311,541 | + | +0.3 | |||
5,311,669 | + | -0.1 | |||
5,311,669 | + | +0.5 | |||
5,311,670 | - | +0.9 | |||
5,311,677 | - | -1.1 | |||
5,311,706 | - | -2.3 | |||
5,311,751 | + | -0.9 | |||
5,311,821 | + | BWI76_RS25560 | 0.14 | -1.2 | |
5,311,843 | + | BWI76_RS25560 | 0.17 | -2.3 | |
5,311,958 | + | BWI76_RS25560 | 0.32 | +0.5 | |
5,312,114 | - | BWI76_RS25560 | 0.53 | -0.6 | |
5,312,162 | - | BWI76_RS25560 | 0.60 | +0.3 | |
5,312,205 | + | BWI76_RS25560 | 0.66 | -0.9 | |
5,312,273 | + | BWI76_RS25560 | 0.75 | -2.7 | |
5,312,308 | - | BWI76_RS25560 | 0.80 | -0.4 | |
5,312,322 | - | BWI76_RS25560 | 0.82 | -3.1 | |
5,312,327 | - | BWI76_RS25560 | 0.82 | +0.3 | |
5,312,362 | - | BWI76_RS25560 | 0.87 | +0.1 | |
5,312,372 | - | BWI76_RS25560 | 0.88 | -1.7 | |
5,312,718 | + | +0.5 | |||
5,313,230 | + | BWI76_RS25565 | 0.46 | -0.7 |
Or see this region's nucleotide sequence