Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22800
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,753,793 | + | +1.2 | |||
4,753,793 | + | +0.5 | |||
4,753,964 | - | +2.2 | |||
4,754,343 | + | BWI76_RS22800 | 0.56 | +0.5 | |
4,754,483 | + | BWI76_RS22800 | 0.74 | +0.6 | |
4,754,495 | + | BWI76_RS22800 | 0.75 | -2.6 | |
4,754,495 | + | BWI76_RS22800 | 0.75 | -0.2 | |
4,754,512 | + | BWI76_RS22800 | 0.77 | -1.3 | |
4,754,563 | - | BWI76_RS22800 | 0.84 | -2.1 | |
4,754,565 | + | BWI76_RS22800 | 0.84 | -0.7 | |
4,754,573 | - | BWI76_RS22800 | 0.85 | -0.9 | |
4,754,648 | + | -0.3 | |||
4,754,666 | - | -1.8 | |||
4,754,825 | - | +0.9 | |||
4,754,982 | - | BWI76_RS22805 | 0.10 | +0.6 | |
4,755,009 | - | BWI76_RS22805 | 0.12 | -2.1 | |
4,755,251 | + | BWI76_RS22805 | 0.22 | -2.0 | |
4,755,293 | - | BWI76_RS22805 | 0.24 | -5.2 | |
4,755,422 | - | BWI76_RS22805 | 0.30 | +0.5 | |
4,755,424 | + | BWI76_RS22805 | 0.30 | -4.0 | |
4,755,461 | - | BWI76_RS22805 | 0.32 | -0.6 |
Or see this region's nucleotide sequence