Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11120

Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11110 and BWI76_RS11115 overlap by 11 nucleotidesBWI76_RS11115 and BWI76_RS11120 overlap by 4 nucleotidesBWI76_RS11120 and BWI76_RS11125 are separated by 10 nucleotides BWI76_RS11110: BWI76_RS11110 - cell division protein YceG, at 2,342,804 to 2,343,826 _RS11110 BWI76_RS11115: BWI76_RS11115 - dTMP kinase, at 2,343,816 to 2,344,457 _RS11115 BWI76_RS11120: BWI76_RS11120 - DNA polymerase III subunit delta', at 2,344,454 to 2,345,458 _RS11120 BWI76_RS11125: BWI76_RS11125 - metal-dependent hydrolase, at 2,345,469 to 2,346,263 _RS11125 Position (kb) 2344 2345 2346Strain fitness (log2 ratio) -1 0 1at 2346.003 kb on + strand, within BWI76_RS11125at 2346.283 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
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2,346,003 + BWI76_RS11125 0.67 +0.8
2,346,283 - -0.2

Or see this region's nucleotide sequence