Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10650
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,247,922 | + | +0.1 | |||
2,248,058 | + | BWI76_RS10645 | 0.11 | -1.0 | |
2,248,058 | + | BWI76_RS10645 | 0.11 | -2.4 | |
2,248,058 | + | BWI76_RS10645 | 0.11 | -3.2 | |
2,248,071 | - | BWI76_RS10645 | 0.13 | -2.2 | |
2,248,354 | + | BWI76_RS10645 | 0.50 | +0.4 | |
2,248,411 | + | BWI76_RS10645 | 0.57 | -0.1 | |
2,248,419 | - | BWI76_RS10645 | 0.58 | +0.1 | |
2,248,419 | - | BWI76_RS10645 | 0.58 | +0.3 | |
2,248,488 | + | BWI76_RS10645 | 0.67 | +1.0 | |
2,249,028 | + | BWI76_RS10650 | 0.48 | +0.2 | |
2,249,048 | - | BWI76_RS10650 | 0.54 | -1.8 | |
2,249,148 | + | BWI76_RS10650 | 0.83 | -1.6 | |
2,249,150 | + | BWI76_RS10650 | 0.83 | -0.0 | |
2,249,156 | - | BWI76_RS10650 | 0.85 | -3.4 | |
2,249,156 | - | BWI76_RS10650 | 0.85 | -0.2 | |
2,249,389 | + | BWI76_RS10655 | 0.19 | -2.6 | |
2,249,389 | + | BWI76_RS10655 | 0.19 | -2.5 | |
2,249,389 | + | BWI76_RS10655 | 0.19 | +0.4 | |
2,249,397 | - | BWI76_RS10655 | 0.20 | -2.1 | |
2,249,397 | - | BWI76_RS10655 | 0.20 | +0.2 | |
2,250,094 | - | -0.2 | |||
2,250,097 | + | +0.2 |
Or see this region's nucleotide sequence