Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09555
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,997,556 | - | BWI76_RS09550 | 0.29 | +0.3 | |
1,997,744 | - | BWI76_RS09550 | 0.48 | +0.2 | |
1,997,750 | - | BWI76_RS09550 | 0.48 | +0.8 | |
1,998,198 | - | +0.2 | |||
1,998,235 | + | +0.1 | |||
1,998,310 | - | -0.0 | |||
1,998,320 | + | -1.3 | |||
1,998,492 | + | -2.3 | |||
1,998,919 | - | BWI76_RS09555 | 0.29 | -0.1 | |
1,999,118 | - | BWI76_RS09555 | 0.40 | +0.7 | |
1,999,411 | - | BWI76_RS09555 | 0.57 | +1.1 | |
1,999,717 | + | BWI76_RS09555 | 0.75 | +1.2 | |
2,000,108 | - | -0.3 | |||
2,000,178 | + | -1.3 | |||
2,000,441 | - | BWI76_RS09560 | 0.34 | +0.8 | |
2,000,602 | - | BWI76_RS09560 | 0.71 | -2.7 | |
2,000,916 | - | BWI76_RS09565 | 0.15 | +0.1 | |
2,000,965 | + | BWI76_RS09565 | 0.20 | +0.5 |
Or see this region's nucleotide sequence