Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08915
Experiment: LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,876,162 | + | BWI76_RS08910 | 0.46 | -2.9 | |
1,876,245 | - | BWI76_RS08910 | 0.54 | -2.3 | |
1,876,257 | + | BWI76_RS08910 | 0.55 | -1.4 | |
1,876,316 | - | BWI76_RS08910 | 0.61 | -0.2 | |
1,876,316 | - | BWI76_RS08910 | 0.61 | +0.1 | |
1,876,327 | + | BWI76_RS08910 | 0.62 | -0.6 | |
1,876,374 | + | BWI76_RS08910 | 0.67 | -1.0 | |
1,876,382 | - | BWI76_RS08910 | 0.68 | -1.0 | |
1,876,424 | - | BWI76_RS08910 | 0.72 | +1.0 | |
1,876,569 | - | BWI76_RS08910 | 0.87 | -1.6 | |
1,876,645 | - | -1.5 | |||
1,876,977 | + | +0.1 | |||
1,876,982 | + | +0.7 | |||
1,876,985 | - | -0.5 | |||
1,877,066 | - | BWI76_RS08915 | 0.11 | +1.3 | |
1,877,105 | + | BWI76_RS08915 | 0.14 | +1.2 | |
1,877,165 | - | BWI76_RS08915 | 0.18 | -0.9 | |
1,877,341 | - | -1.4 | |||
1,877,349 | - | BWI76_RS08915 | 0.32 | -0.3 | |
1,877,440 | - | BWI76_RS08915 | 0.38 | -0.5 | |
1,877,478 | + | BWI76_RS08915 | 0.41 | -0.3 | |
1,877,556 | + | BWI76_RS08915 | 0.47 | +0.3 | |
1,877,564 | - | BWI76_RS08915 | 0.48 | +0.5 | |
1,878,281 | - | +0.1 | |||
1,878,315 | + | -0.0 | |||
1,878,794 | - | BWI76_RS08920 | 0.15 | -1.6 | |
1,878,794 | - | BWI76_RS08920 | 0.15 | -0.1 | |
1,878,970 | + | -1.1 |
Or see this region's nucleotide sequence