Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_936

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,102,271	+		Pf6N2E2_935	0.37	-0.3
1,102,271	+		Pf6N2E2_935	0.37	+0.0
1,102,271	+		Pf6N2E2_935	0.37	-0.6
1,102,272	-		Pf6N2E2_935	0.37	+0.3
1,102,272	-		Pf6N2E2_935	0.37	-1.3
1,102,272	-		Pf6N2E2_935	0.37	+0.7
1,102,272	-		Pf6N2E2_935	0.37	+2.2
1,102,275	+		Pf6N2E2_935	0.37	-0.6
1,102,275	+		Pf6N2E2_935	0.37	-0.9
1,102,275	+		Pf6N2E2_935	0.37	+0.7
1,102,275	+		Pf6N2E2_935	0.37	-1.6
1,102,275	+		Pf6N2E2_935	0.37	-0.9
1,102,275	+		Pf6N2E2_935	0.37	+1.5
1,102,275	+		Pf6N2E2_935	0.37	+1.4
1,102,275	+		Pf6N2E2_935	0.37	+0.7
1,102,276	-		Pf6N2E2_935	0.37	-0.2
1,102,276	-		Pf6N2E2_935	0.37	+0.4
1,102,276	-		Pf6N2E2_935	0.37	-1.3
1,102,276	-		Pf6N2E2_935	0.37	+0.7
1,102,276	-		Pf6N2E2_935	0.37	+1.1
1,102,276	-		Pf6N2E2_935	0.37	-0.5
1,102,276	-		Pf6N2E2_935	0.37	-0.0
1,102,276	-		Pf6N2E2_935	0.37	+0.2
1,102,276	-		Pf6N2E2_935	0.37	+1.0
1,102,278	-		Pf6N2E2_935	0.38	-0.0
1,102,520	+		Pf6N2E2_935	0.55	-0.3
1,102,530	+		Pf6N2E2_935	0.55	+2.0
1,102,530	+		Pf6N2E2_935	0.55	+0.7
1,102,531	-		Pf6N2E2_935	0.56	-1.0
1,102,562	+		Pf6N2E2_935	0.58	-0.9
1,102,671	+		Pf6N2E2_935	0.65	+2.0
1,102,762	-		Pf6N2E2_935	0.72	-1.0
1,102,808	+		Pf6N2E2_935	0.75	-0.7
1,102,809	-		Pf6N2E2_935	0.75	+0.3
1,102,815	+		Pf6N2E2_935	0.76	+2.7
1,102,893	+		Pf6N2E2_935	0.81	+0.7
1,102,893	+		Pf6N2E2_935	0.81	-0.5
1,102,893	+		Pf6N2E2_935	0.81	+0.2
1,102,999	+		Pf6N2E2_935	0.89	-0.3
1,103,001	+		Pf6N2E2_935	0.89	+0.7
1,103,002	-		Pf6N2E2_935	0.89	-2.3
1,103,123	-				-0.8
1,103,133	+				+0.2
1,103,133	+				+0.4
1,103,134	-				+1.7
1,103,167	+				+1.1
1,103,168	-				+0.8
1,103,168	-				+0.1
1,103,260	+				-0.3
1,103,261	-				-0.3
1,103,278	+				+1.1
1,103,287	+				-0.3
1,103,287	+				+0.1
1,103,287	+				-0.1
1,103,288	-				+1.8
1,103,288	-				+1.8
1,103,308	+				+1.2
1,103,309	-				+0.3
1,103,309	-				+0.7
1,103,311	+				-0.1
1,103,312	-				+1.3
1,103,312	-				-2.1
1,103,382	-		Pf6N2E2_936	0.11	+0.2
1,103,382	-		Pf6N2E2_936	0.11	+0.3
1,103,595	-		Pf6N2E2_936	0.30	+0.8
1,103,629	+		Pf6N2E2_936	0.33	-0.2
1,103,629	+		Pf6N2E2_936	0.33	-1.5
1,103,650	+		Pf6N2E2_936	0.35	+0.7
1,103,687	+		Pf6N2E2_936	0.38	+0.7
1,103,877	+		Pf6N2E2_936	0.55	-2.1
1,103,989	+		Pf6N2E2_936	0.65	-0.1
1,103,990	-		Pf6N2E2_936	0.65	-1.3
1,103,995	+		Pf6N2E2_936	0.66	-1.1
1,103,995	+		Pf6N2E2_936	0.66	+0.3
1,104,190	+		Pf6N2E2_936	0.83	-0.3
1,104,190	+		Pf6N2E2_936	0.83	+0.2
1,104,212	+		Pf6N2E2_936	0.85	+1.4
1,104,212	+		Pf6N2E2_936	0.85	-0.5
1,104,231	+		Pf6N2E2_936	0.87	-0.8
1,104,231	+		Pf6N2E2_936	0.87	+0.1
1,104,231	+		Pf6N2E2_936	0.87	+0.9
1,104,231	+		Pf6N2E2_936	0.87	-1.1
1,104,232	-		Pf6N2E2_936	0.87	-0.9
1,104,232	-		Pf6N2E2_936	0.87	-1.7
1,104,259	+		Pf6N2E2_936	0.89	+0.5
1,104,263	-		Pf6N2E2_936	0.89	-0.5
1,104,503	+				+3.0
1,104,504	-				+0.3
1,104,504	-				-0.4
1,104,537	+		Pf6N2E2_937	0.10	-0.9
1,104,537	+		Pf6N2E2_937	0.10	-0.3
1,104,538	-		Pf6N2E2_937	0.10	-0.8
1,104,653	+		Pf6N2E2_937	0.25	+0.9
1,104,827	+		Pf6N2E2_937	0.48	-0.3
1,104,827	+		Pf6N2E2_937	0.48	-0.1
1,104,827	+		Pf6N2E2_937	0.48	-0.7
1,104,828	-				+0.7
1,104,908	+		Pf6N2E2_937	0.59	+0.7
1,104,999	+		Pf6N2E2_937	0.71	-1.9
1,104,999	+		Pf6N2E2_937	0.71	+0.1
1,104,999	+		Pf6N2E2_937	0.71	+0.7
1,104,999	+		Pf6N2E2_937	0.71	+0.7
1,105,000	-		Pf6N2E2_937	0.71	-0.6
1,105,000	-		Pf6N2E2_937	0.71	+1.0
1,105,000	-		Pf6N2E2_937	0.71	-0.3
1,105,000	-		Pf6N2E2_937	0.71	-0.2
1,105,000	-		Pf6N2E2_937	0.71	-0.9
1,105,000	-		Pf6N2E2_937	0.71	-0.2
1,105,000	-		Pf6N2E2_937	0.71	+0.7
1,105,000	-		Pf6N2E2_937	0.71	+0.6
1,105,000	-		Pf6N2E2_937	0.71	-1.0
1,105,066	+		Pf6N2E2_937	0.80	+0.7
1,105,066	+		Pf6N2E2_937	0.80	+0.7
1,105,066	+		Pf6N2E2_937	0.80	+0.2
1,105,067	-		Pf6N2E2_937	0.80	+0.1
1,105,067	-		Pf6N2E2_937	0.80	+0.7
1,105,122	+		Pf6N2E2_937	0.87	-0.0
1,105,127	-		Pf6N2E2_937	0.88	+2.0
1,105,199	-				+0.2
1,105,304	+				-0.8
1,105,305	-				-0.2
1,105,305	-				+2.3
1,105,328	-				+0.3
1,105,328	-				-1.1