Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16080

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
3,652,529	+		PFLU_RS16075	0.43	-1.2
3,652,529	+		PFLU_RS16075	0.43	-0.9
3,652,529	+		PFLU_RS16075	0.43	-2.2
3,652,530	-		PFLU_RS16075	0.43	-1.9
3,653,040	+		PFLU_RS16075	0.78	-2.7
3,653,040	+		PFLU_RS16075	0.78	-3.7
3,653,040	+		PFLU_RS16075	0.78	-1.9
3,653,041	-		PFLU_RS16075	0.78	-2.2
3,653,109	+		PFLU_RS16075	0.83	-3.2
3,653,110	-		PFLU_RS16075	0.83	+0.1
3,653,372	+				-3.0
3,653,390	+				-2.3
3,653,390	+				-2.5
3,653,405	+				-2.0
3,653,443	+				+0.1
3,653,444	-				-0.5
3,653,444	-				-2.7
3,653,444	-				-2.5
3,653,444	-				-1.3
3,653,445	+				-2.5
3,653,556	+		PFLU_RS16080	0.15	-1.9
3,653,556	+		PFLU_RS16080	0.15	-2.6
3,653,556	+		PFLU_RS16080	0.15	-2.2
3,653,556	+		PFLU_RS16080	0.15	-0.9
3,653,557	-		PFLU_RS16080	0.15	-1.5
3,653,691	-		PFLU_RS16080	0.31	-2.7
3,653,757	+		PFLU_RS16080	0.39	-2.0
3,653,757	+		PFLU_RS16080	0.39	-2.6
3,653,757	+		PFLU_RS16080	0.39	-2.9
3,653,757	+		PFLU_RS16080	0.39	-1.2
3,653,757	+		PFLU_RS16080	0.39	-1.9
3,653,757	+		PFLU_RS16080	0.39	+1.1
3,653,757	+		PFLU_RS16080	0.39	-3.0
3,653,757	+		PFLU_RS16080	0.39	-2.5
3,653,757	+		PFLU_RS16080	0.39	-2.2
3,653,757	+		PFLU_RS16080	0.39	-2.3
3,653,757	+		PFLU_RS16080	0.39	-1.5
3,653,757	+		PFLU_RS16080	0.39	-3.5
3,653,757	+		PFLU_RS16080	0.39	-1.7
3,653,757	+		PFLU_RS16080	0.39	-0.5
3,653,757	+		PFLU_RS16080	0.39	-2.7
3,653,757	+		PFLU_RS16080	0.39	-2.5
3,653,757	+		PFLU_RS16080	0.39	-2.0
3,653,757	+		PFLU_RS16080	0.39	-0.9
3,653,757	+		PFLU_RS16080	0.39	-3.6
3,653,758	-		PFLU_RS16080	0.39	-2.2
3,653,758	-		PFLU_RS16080	0.39	-3.0
3,653,758	-		PFLU_RS16080	0.39	-1.9
3,653,758	-		PFLU_RS16080	0.39	+0.1
3,653,758	-		PFLU_RS16080	0.39	-1.9
3,653,758	-		PFLU_RS16080	0.39	-1.7
3,653,758	-		PFLU_RS16080	0.39	-2.0
3,653,758	-		PFLU_RS16080	0.39	-2.6
3,653,758	-		PFLU_RS16080	0.39	-0.5
3,653,758	-		PFLU_RS16080	0.39	-3.0
3,653,758	-		PFLU_RS16080	0.39	-2.9
3,653,758	-		PFLU_RS16080	0.39	-3.1
3,653,758	-		PFLU_RS16080	0.39	-2.6
3,653,760	+		PFLU_RS16080	0.39	+1.1
3,653,760	+		PFLU_RS16080	0.39	-0.0
3,653,760	+		PFLU_RS16080	0.39	-1.9
3,653,761	-		PFLU_RS16080	0.39	-1.2
3,653,952	+		PFLU_RS16080	0.62	-3.4
3,653,952	+		PFLU_RS16080	0.62	-1.7
3,653,952	+		PFLU_RS16080	0.62	-0.9
3,653,952	+		PFLU_RS16080	0.62	-1.7
3,653,952	+		PFLU_RS16080	0.62	-2.7
3,653,953	-		PFLU_RS16080	0.62	-2.5
3,653,953	-		PFLU_RS16080	0.62	-2.8
3,653,953	-		PFLU_RS16080	0.62	-1.7
3,653,953	-		PFLU_RS16080	0.62	-2.8
3,653,953	-		PFLU_RS16080	0.62	-1.2
3,653,953	-		PFLU_RS16080	0.62	-1.9
3,653,953	-		PFLU_RS16080	0.62	-2.5
3,653,953	-		PFLU_RS16080	0.62	-2.3
3,653,953	-		PFLU_RS16080	0.62	-1.9
3,654,042	+		PFLU_RS16080	0.73	-3.8
3,654,042	+		PFLU_RS16080	0.73	-2.2
3,654,043	-		PFLU_RS16080	0.73	-0.2
3,654,134	+		PFLU_RS16080	0.84	-1.2
3,654,135	-		PFLU_RS16080	0.84	-0.3
3,654,135	-		PFLU_RS16080	0.84	-1.9
3,654,255	+				-1.9
3,654,255	+				-2.5
3,654,256	-				-1.9
3,654,256	-				-2.2
3,654,256	-				-3.0
3,654,256	-				-2.5
3,654,271	+				-0.5
3,654,337	-				-0.5
3,654,368	+				-1.9
3,654,434	+				-3.3
3,654,434	+				-3.5
3,654,435	-				+5.3
3,654,447	+				-0.5
3,654,817	+		PFLU_RS16085	0.69	+2.4
3,654,955	+				+0.9
3,654,955	+				+0.6
3,654,955	+				+1.7
3,654,955	+				+1.6
3,654,955	+				+0.1
3,654,956	-				+1.7
3,654,992	-				+5.5
3,655,057	+				+5.4
3,655,057	+				+5.4
3,655,057	+				+6.3
3,655,114	+		PFLU_RS16090	0.11	+6.1
3,655,114	+		PFLU_RS16090	0.11	+6.1
3,655,114	+		PFLU_RS16090	0.11	+6.8
3,655,114	+		PFLU_RS16090	0.11	+6.6
3,655,114	+		PFLU_RS16090	0.11	+7.0
3,655,114	+		PFLU_RS16090	0.11	+7.1
3,655,114	+		PFLU_RS16090	0.11	+6.8
3,655,114	+		PFLU_RS16090	0.11	+6.4
3,655,115	-		PFLU_RS16090	0.11	+5.6
3,655,115	-		PFLU_RS16090	0.11	+6.5
3,655,115	-		PFLU_RS16090	0.11	+2.8
3,655,115	-		PFLU_RS16090	0.11	+7.4
3,655,115	-		PFLU_RS16090	0.11	+6.9
3,655,195	+		PFLU_RS16090	0.17	+4.9
3,655,195	+		PFLU_RS16090	0.17	+6.8
3,655,195	+		PFLU_RS16090	0.17	+6.9
3,655,195	+		PFLU_RS16090	0.17	+5.8
3,655,195	+		PFLU_RS16090	0.17	+6.9
3,655,196	-		PFLU_RS16090	0.17	+6.4
3,655,196	-		PFLU_RS16090	0.17	+7.1
3,655,196	-		PFLU_RS16090	0.17	+7.7
3,655,244	-		PFLU_RS16090	0.21	+7.0
3,655,249	+		PFLU_RS16090	0.21	+7.6
3,655,249	+		PFLU_RS16090	0.21	+6.9
3,655,249	+		PFLU_RS16090	0.21	+6.6
3,655,249	+		PFLU_RS16090	0.21	+6.2
3,655,249	+		PFLU_RS16090	0.21	+6.6
3,655,249	+		PFLU_RS16090	0.21	+5.4
3,655,249	+		PFLU_RS16090	0.21	+5.9
3,655,249	+		PFLU_RS16090	0.21	+7.1
3,655,249	+		PFLU_RS16090	0.21	+7.2
3,655,249	+		PFLU_RS16090	0.21	+5.4
3,655,249	+		PFLU_RS16090	0.21	+5.9
3,655,249	+		PFLU_RS16090	0.21	+6.0
3,655,249	+		PFLU_RS16090	0.21	+7.4
3,655,249	+		PFLU_RS16090	0.21	+5.4
3,655,249	+		PFLU_RS16090	0.21	+4.7
3,655,249	+		PFLU_RS16090	0.21	+6.9
3,655,249	+		PFLU_RS16090	0.21	+5.2
3,655,249	+		PFLU_RS16090	0.21	+7.2
3,655,249	+		PFLU_RS16090	0.21	+5.7
3,655,249	+		PFLU_RS16090	0.21	+7.2
3,655,250	-		PFLU_RS16090	0.21	+5.8
3,655,250	-		PFLU_RS16090	0.21	+7.7
3,655,250	-		PFLU_RS16090	0.21	+6.9
3,655,250	-		PFLU_RS16090	0.21	+8.0
3,655,250	-		PFLU_RS16090	0.21	+6.4
3,655,250	-		PFLU_RS16090	0.21	+7.0
3,655,250	-		PFLU_RS16090	0.21	+6.5
3,655,250	-		PFLU_RS16090	0.21	+6.0
3,655,250	-		PFLU_RS16090	0.21	+6.2
3,655,250	-		PFLU_RS16090	0.21	+7.3
3,655,250	-		PFLU_RS16090	0.21	+6.1
3,655,250	-		PFLU_RS16090	0.21	+6.4
3,655,250	-		PFLU_RS16090	0.21	+0.1
3,655,250	-		PFLU_RS16090	0.21	+5.8
3,655,250	-		PFLU_RS16090	0.21	+6.4
3,655,250	-		PFLU_RS16090	0.21	+1.9
3,655,250	-		PFLU_RS16090	0.21	+6.2
3,655,250	-		PFLU_RS16090	0.21	+6.4