Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS19140

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
4,391,139	-		HSERO_RS19135	0.20	+0.2
4,391,370	-				-0.0
4,391,417	+				-0.2
4,391,483	-				-0.2
4,391,553	+				+0.1
4,391,563	-				-0.7
4,391,565	+				-0.1
4,391,700	+				-0.4
4,391,732	-				-0.1
4,392,035	+		HSERO_RS19140	0.34	-0.7
4,392,251	-		HSERO_RS19140	0.53	-0.1
4,392,310	+		HSERO_RS19140	0.58	-0.2
4,393,011	-				-0.5
4,393,192	-		HSERO_RS19145	0.22	-0.8
4,393,230	-				+1.4
4,393,372	-		HSERO_RS19145	0.41	-0.2
4,393,475	-		HSERO_RS19145	0.53	-0.3
4,393,481	-		HSERO_RS19145	0.53	+0.2
4,393,561	+		HSERO_RS19145	0.62	+0.3
4,393,702	+		HSERO_RS19145	0.77	+0.6