Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS31055

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
5,253,123	+		PFLU_RS23370	0.67	-0.2
5,253,123	+		PFLU_RS23370	0.67	-1.5
5,253,124	-		PFLU_RS23370	0.67	+0.8
5,253,242	+		PFLU_RS23370	0.73	+0.2
5,253,243	-		PFLU_RS23370	0.74	+0.6
5,253,243	-		PFLU_RS23370	0.74	+1.0
5,253,244	+		PFLU_RS23370	0.74	-0.6
5,253,295	-		PFLU_RS23370	0.76	-0.4
5,253,314	-		PFLU_RS23370	0.77	+1.3
5,253,315	+		PFLU_RS23370	0.77	-0.2
5,253,316	-		PFLU_RS23370	0.77	+0.8
5,253,467	+		PFLU_RS23370	0.85	+0.9
5,253,627	-				+1.3
5,253,645	-				+2.2
5,253,775	+				+0.6
5,253,790	-				+1.9
5,253,899	+				+1.2
5,253,899	+				-0.0
5,253,899	+				-0.7
5,253,899	+				+3.2
5,253,900	-				+1.0
5,253,900	-				+1.2
5,253,918	+				-1.6
5,253,918	+				+0.2
5,253,918	+				-0.2
5,253,918	+				+0.9
5,253,918	+				-0.7
5,253,918	+				+0.3
5,253,918	+				-0.2
5,253,918	+				+0.4
5,253,919	-				-0.6
5,253,919	-				-1.0
5,253,919	-				+0.3
5,253,919	-				-0.1
5,253,919	-				+1.3
5,253,919	-				-0.4
5,253,919	-				+1.7
5,253,919	-				+0.5
5,253,938	+				-0.5
5,253,938	+				-0.1
5,253,938	+				-0.3
5,253,938	+				-0.1
5,253,938	+				-0.1
5,253,938	+				-1.4
5,253,938	+				-0.8
5,253,939	-				-1.4
5,253,939	-				+0.5
5,253,939	-				+1.1
5,253,939	-				+0.5
5,253,939	-				+0.3
5,253,939	-				-0.1
5,253,939	-				+1.7
5,253,939	-				+0.5
5,253,966	+				+0.1
5,253,966	+				+0.5
5,253,966	+				-0.3
5,253,966	+				-0.1
5,253,967	-				+0.7
5,253,967	-				+1.7
5,253,967	-				+0.2
5,253,967	-				-1.4
5,253,986	+				+0.3
5,253,987	-				+1.9
5,254,024	+				-0.4
5,254,025	-				+0.5
5,254,051	+				-0.1
5,254,051	+				-0.9
5,254,051	+				-0.3
5,254,051	+				-0.2
5,254,052	-				+0.7
5,254,052	-				-0.5
5,254,062	+				+0.6
5,254,062	+				-0.8
5,254,062	+				-0.3
5,254,062	+				+0.3
5,254,062	+				-1.1
5,254,062	+				-1.1
5,254,062	+				-0.8
5,254,062	+				+1.4
5,254,063	-				+1.1
5,254,063	-				+1.3
5,254,063	-				+1.7
5,254,063	-				+0.4
5,254,063	-				+1.4
5,254,063	-				+1.4
5,254,063	-				+0.8
5,254,063	-				-1.7
5,254,063	-				+0.9
5,254,063	-				-0.5
5,254,066	+				+0.2
5,254,066	+				+0.7
5,254,066	+				-0.5
5,254,066	+				-0.3
5,254,067	-				-0.5
5,254,067	-				+0.6
5,254,112	+				-1.6
5,254,112	+				-0.6
5,254,112	+				-1.0
5,254,112	+				+0.0
5,254,112	+				+1.0
5,254,113	-				+0.4
5,254,113	-				+1.7
5,254,113	-				-0.5
5,254,113	-				+0.4
5,254,113	-				+1.4
5,254,117	+				-1.2
5,254,117	+				+0.7
5,254,117	+				+0.0
5,254,117	+				-0.3
5,254,117	+				-1.1
5,254,118	-				-0.8
5,254,118	-				+0.3
5,254,118	-				+1.2
5,254,118	-				+0.9
5,254,125	-				-1.8
5,254,125	-				-0.6
5,254,169	-		PFLU_RS31055	0.12	+1.3
5,254,222	-		PFLU_RS31055	0.22	+0.1
5,254,222	-		PFLU_RS31055	0.22	-0.3
5,254,244	+		PFLU_RS31055	0.26	+0.2
5,254,244	+		PFLU_RS31055	0.26	+0.6
5,254,244	+		PFLU_RS31055	0.26	-1.8
5,254,244	+		PFLU_RS31055	0.26	-0.3
5,254,244	+		PFLU_RS31055	0.26	+0.4
5,254,245	-		PFLU_RS31055	0.26	+0.9
5,254,245	-		PFLU_RS31055	0.26	+1.5
5,254,273	+		PFLU_RS31055	0.32	+2.0
5,254,274	-		PFLU_RS31055	0.32	-0.7
5,254,331	+		PFLU_RS31055	0.43	-0.4
5,254,331	+		PFLU_RS31055	0.43	+0.9
5,254,331	+		PFLU_RS31055	0.43	+1.5
5,254,332	-		PFLU_RS31055	0.43	+1.3
5,254,332	-		PFLU_RS31055	0.43	+0.2
5,254,332	-		PFLU_RS31055	0.43	-0.3
5,254,346	+		PFLU_RS31055	0.45	-0.1
5,254,346	+		PFLU_RS31055	0.45	+0.4
5,254,346	+		PFLU_RS31055	0.45	+0.5
5,254,346	+		PFLU_RS31055	0.45	+0.2
5,254,347	-		PFLU_RS31055	0.46	+0.6
5,254,347	-		PFLU_RS31055	0.46	+1.2
5,254,347	-		PFLU_RS31055	0.46	-0.3
5,254,347	-		PFLU_RS31055	0.46	+1.4
5,254,352	+		PFLU_RS31055	0.47	-0.8
5,254,352	+		PFLU_RS31055	0.47	-0.5
5,254,352	+		PFLU_RS31055	0.47	+0.7
5,254,352	+		PFLU_RS31055	0.47	-0.6
5,254,352	+		PFLU_RS31055	0.47	+0.5
5,254,352	+		PFLU_RS31055	0.47	+0.6
5,254,352	+		PFLU_RS31055	0.47	-0.2
5,254,352	+		PFLU_RS31055	0.47	-0.3
5,254,353	-		PFLU_RS31055	0.47	-0.3
5,254,353	-		PFLU_RS31055	0.47	-0.1
5,254,353	-		PFLU_RS31055	0.47	+0.7
5,254,353	-		PFLU_RS31055	0.47	+0.7
5,254,372	-		PFLU_RS31055	0.50	+0.4
5,254,378	+		PFLU_RS31055	0.51	+0.2
5,254,379	-		PFLU_RS31055	0.52	+0.4
5,254,379	-		PFLU_RS31055	0.52	-1.7
5,254,379	-		PFLU_RS31055	0.52	+0.4
5,254,379	-		PFLU_RS31055	0.52	-0.2
5,254,379	-		PFLU_RS31055	0.52	+1.0
5,254,452	+		PFLU_RS31055	0.65	-0.6
5,254,452	+		PFLU_RS31055	0.65	-1.4
5,254,452	+		PFLU_RS31055	0.65	+0.9
5,254,453	-		PFLU_RS31055	0.65	+1.2
5,254,453	-		PFLU_RS31055	0.65	-1.1
5,254,453	-		PFLU_RS31055	0.65	-0.0
5,254,453	-		PFLU_RS31055	0.65	+0.2
5,254,535	+		PFLU_RS31055	0.81	-0.7
5,254,535	+		PFLU_RS31055	0.81	+0.8
5,254,535	+		PFLU_RS31055	0.81	+0.9
5,254,535	+		PFLU_RS31055	0.81	+1.4
5,254,535	+		PFLU_RS31055	0.81	+1.3
5,254,535	+		PFLU_RS31055	0.81	-2.3
5,254,535	+		PFLU_RS31055	0.81	+0.7
5,254,536	-		PFLU_RS31055	0.81	-0.6
5,254,536	-		PFLU_RS31055	0.81	+1.2
5,254,536	-		PFLU_RS31055	0.81	-0.9
5,254,536	-		PFLU_RS31055	0.81	+0.2
5,254,536	-		PFLU_RS31055	0.81	-0.2
5,254,536	-		PFLU_RS31055	0.81	-0.6
5,254,539	+		PFLU_RS31055	0.82	-0.1
5,254,539	+		PFLU_RS31055	0.82	-1.3
5,254,539	+		PFLU_RS31055	0.82	+0.0
5,254,539	+		PFLU_RS31055	0.82	-0.4
5,254,539	+		PFLU_RS31055	0.82	-0.1
5,254,539	+		PFLU_RS31055	0.82	-1.3
5,254,539	+		PFLU_RS31055	0.82	+1.8
5,254,539	+		PFLU_RS31055	0.82	+0.5
5,254,539	+		PFLU_RS31055	0.82	+0.6
5,254,539	+		PFLU_RS31055	0.82	-0.5
5,254,539	+		PFLU_RS31055	0.82	+0.2
5,254,539	+		PFLU_RS31055	0.82	+0.7
5,254,539	+		PFLU_RS31055	0.82	+0.3
5,254,539	+		PFLU_RS31055	0.82	+1.1
5,254,539	+		PFLU_RS31055	0.82	-1.0
5,254,539	+		PFLU_RS31055	0.82	-0.7
5,254,539	+		PFLU_RS31055	0.82	-0.8
5,254,539	+		PFLU_RS31055	0.82	+0.7
5,254,540	-		PFLU_RS31055	0.82	+0.9
5,254,540	-		PFLU_RS31055	0.82	+1.0
5,254,540	-		PFLU_RS31055	0.82	-0.3
5,254,540	-		PFLU_RS31055	0.82	+1.2
5,254,540	-		PFLU_RS31055	0.82	+0.9
5,254,540	-		PFLU_RS31055	0.82	+0.7
5,254,540	-		PFLU_RS31055	0.82	-1.1
5,254,540	-		PFLU_RS31055	0.82	+0.7
5,254,540	-		PFLU_RS31055	0.82	+2.4
5,254,540	-		PFLU_RS31055	0.82	+0.4
5,254,540	-		PFLU_RS31055	0.82	+0.7
5,254,540	-		PFLU_RS31055	0.82	+1.2
5,254,540	-		PFLU_RS31055	0.82	-1.1
5,254,540	-		PFLU_RS31055	0.82	+0.5
5,254,540	-		PFLU_RS31055	0.82	+0.4
5,254,540	-		PFLU_RS31055	0.82	+0.6
5,254,540	-		PFLU_RS31055	0.82	+0.6
5,254,540	-		PFLU_RS31055	0.82	+1.8
5,254,540	-		PFLU_RS31055	0.82	-1.1
5,254,631	+				-0.9
5,254,631	+				+2.2
5,254,631	+				-0.5
5,254,631	+				+1.7
5,254,631	+				+0.4
5,254,631	+				+1.0
5,254,631	+				+0.0
5,254,632	-				-0.8
5,254,632	-				-0.9
5,254,632	-				+0.6
5,254,632	-				+0.2
5,254,632	-				-1.0
5,254,632	-				+2.1
5,254,635	-				+0.5
5,254,661	+				-1.0
5,254,661	+				-0.5
5,254,661	+				+0.2
5,254,661	+				-0.2
5,254,661	+				+0.8
5,254,661	+				+1.4
5,254,661	+				-0.8
5,254,661	+				-0.4
5,254,661	+				+1.7
5,254,661	+				+0.7
5,254,661	+				+0.2
5,254,661	+				-1.1
5,254,661	+				+0.9
5,254,662	-				+2.5
5,254,662	-				-0.1
5,254,662	-				+3.7
5,254,662	-				-2.0
5,254,662	-				+0.0
5,254,662	-				+1.7
5,254,662	-				-0.3
5,254,662	-				+0.7
5,254,667	+				-0.3
5,254,668	-				-0.6
5,254,688	+				-0.7
5,254,689	-				-0.5
5,254,689	-				+1.0
5,254,695	+				-1.8
5,254,696	-				+3.3
5,254,721	-				-0.6
5,254,721	-				-0.5
5,254,736	-				+0.7
5,254,736	-				+0.4
5,254,736	-				+0.2
5,254,736	-				+1.3
5,254,742	-				+0.3
5,254,742	-				+3.0
5,254,742	-				-1.1
5,254,742	-				+0.4
5,254,742	-				-1.6
5,254,744	+				-0.8
5,254,744	+				+0.9
5,254,744	+				-0.1
5,254,744	+				+0.4
5,254,744	+				+1.0
5,254,744	+				-1.7
5,254,744	+				-0.2
5,254,745	-				-1.1
5,254,745	-				-1.4
5,254,745	-				-2.3
5,254,799	+				+0.9
5,254,799	+				-0.7
5,254,799	+				+0.2
5,254,799	+				-0.9
5,254,799	+				+1.3
5,254,799	+				-1.2
5,254,799	+				+0.7
5,254,799	+				-0.0
5,254,799	+				-0.5
5,254,799	+				+0.7
5,254,799	+				+1.2
5,254,799	+				+1.3
5,254,799	+				-0.3
5,254,800	-				+1.3
5,254,800	-				+0.4
5,254,800	-				+0.1
5,254,800	-				+1.4
5,254,800	-				+0.0
5,254,800	-				+0.6
5,254,800	-				-0.8
5,254,800	-				-0.6
5,254,800	-				+0.3
5,254,803	+				+1.0
5,254,803	+				+1.1
5,254,803	+				-0.7
5,254,803	+				-3.0
5,254,803	+				+0.3
5,254,803	+				-0.6
5,254,803	+				+1.0
5,254,803	+				-1.7
5,254,803	+				+0.2
5,254,803	+				-0.0
5,254,803	+				-0.6
5,254,803	+				+1.7
5,254,804	-				-0.1
5,254,804	-				-0.8
5,254,804	-				+1.3
5,254,804	-				-1.3
5,254,804	-				-0.1
5,254,804	-				+1.6
5,254,804	-				+1.4
5,254,804	-				+1.4
5,254,804	-				+0.6
5,254,945	+		PFLU_RS23375	0.29	+0.5
5,254,945	+		PFLU_RS23375	0.29	-1.2
5,254,962	+		PFLU_RS23375	0.32	+0.1
5,254,962	+		PFLU_RS23375	0.32	-0.6
5,254,962	+		PFLU_RS23375	0.32	+0.6
5,254,962	+		PFLU_RS23375	0.32	-1.6
5,254,962	+		PFLU_RS23375	0.32	+0.4
5,254,962	+		PFLU_RS23375	0.32	-1.7
5,254,962	+		PFLU_RS23375	0.32	+1.7
5,254,962	+		PFLU_RS23375	0.32	+1.1
5,254,962	+		PFLU_RS23375	0.32	-1.0
5,254,962	+		PFLU_RS23375	0.32	-0.6
5,254,962	+		PFLU_RS23375	0.32	+0.2
5,254,963	-		PFLU_RS23375	0.32	+0.6
5,254,963	-		PFLU_RS23375	0.32	-1.9
5,254,963	-		PFLU_RS23375	0.32	+1.0
5,254,963	-		PFLU_RS23375	0.32	+0.7
5,254,963	-		PFLU_RS23375	0.32	-1.1
5,254,963	-		PFLU_RS23375	0.32	+0.5
5,254,970	+		PFLU_RS23375	0.33	-1.7
5,254,970	+		PFLU_RS23375	0.33	-0.3
5,254,970	+		PFLU_RS23375	0.33	+0.5
5,254,970	+		PFLU_RS23375	0.33	+0.9
5,254,970	+		PFLU_RS23375	0.33	-1.3
5,254,970	+		PFLU_RS23375	0.33	+1.3
5,254,970	+		PFLU_RS23375	0.33	-1.0
5,254,970	+		PFLU_RS23375	0.33	+0.4
5,254,970	+		PFLU_RS23375	0.33	-0.6
5,254,970	+		PFLU_RS23375	0.33	+0.6
5,254,971	-		PFLU_RS23375	0.33	+0.3
5,254,971	-		PFLU_RS23375	0.33	+0.6
5,254,971	-		PFLU_RS23375	0.33	-0.3
5,254,971	-		PFLU_RS23375	0.33	+0.2
5,254,971	-		PFLU_RS23375	0.33	+0.2
5,254,971	-		PFLU_RS23375	0.33	+1.5
5,254,971	-		PFLU_RS23375	0.33	+0.9
5,254,971	-		PFLU_RS23375	0.33	-1.6
5,254,971	-		PFLU_RS23375	0.33	-0.0
5,254,971	-		PFLU_RS23375	0.33	-0.6
5,254,971	-		PFLU_RS23375	0.33	+0.7
5,254,972	+		PFLU_RS23375	0.33	+0.6
5,254,972	+		PFLU_RS23375	0.33	+0.7
5,254,972	+		PFLU_RS23375	0.33	-0.5
5,254,972	+		PFLU_RS23375	0.33	-1.8
5,254,972	+		PFLU_RS23375	0.33	+1.0
5,254,972	+		PFLU_RS23375	0.33	-0.5
5,254,972	+		PFLU_RS23375	0.33	-0.8
5,254,972	+		PFLU_RS23375	0.33	+0.4
5,254,972	+		PFLU_RS23375	0.33	-0.0
5,254,973	-		PFLU_RS23375	0.33	+2.0
5,254,973	-		PFLU_RS23375	0.33	+0.2
5,254,973	-		PFLU_RS23375	0.33	+1.0
5,254,973	-		PFLU_RS23375	0.33	+0.2
5,254,973	-		PFLU_RS23375	0.33	+0.2
5,254,973	-		PFLU_RS23375	0.33	+0.0
5,255,001	+		PFLU_RS23375	0.37	+1.2
5,255,001	+		PFLU_RS23375	0.37	+0.5
5,255,002	-		PFLU_RS23375	0.37	+2.3
5,255,002	-		PFLU_RS23375	0.37	-0.1
5,255,011	+		PFLU_RS23375	0.39	-1.2
5,255,011	+		PFLU_RS23375	0.39	-0.4
5,255,011	+		PFLU_RS23375	0.39	-0.8
5,255,040	+		PFLU_RS23375	0.43	-0.3
5,255,040	+		PFLU_RS23375	0.43	-0.6
5,255,040	+		PFLU_RS23375	0.43	-1.7
5,255,040	+		PFLU_RS23375	0.43	-0.4
5,255,041	-		PFLU_RS23375	0.43	-0.3
5,255,041	-		PFLU_RS23375	0.43	+0.2
5,255,041	-		PFLU_RS23375	0.43	+0.0
5,255,041	-		PFLU_RS23375	0.43	-1.1
5,255,041	-		PFLU_RS23375	0.43	+0.4
5,255,041	-		PFLU_RS23375	0.43	-0.3
5,255,086	+		PFLU_RS23375	0.49	+0.4
5,255,086	+		PFLU_RS23375	0.49	+0.7
5,255,087	-		PFLU_RS23375	0.49	-0.3
5,255,130	+		PFLU_RS23375	0.55	-0.3
5,255,131	-		PFLU_RS23375	0.55	+0.4
5,255,160	+		PFLU_RS23375	0.59	-0.6
5,255,160	+		PFLU_RS23375	0.59	-0.9
5,255,160	+		PFLU_RS23375	0.59	-0.6
5,255,160	+		PFLU_RS23375	0.59	+0.4
5,255,161	-		PFLU_RS23375	0.60	+0.7
5,255,292	+		PFLU_RS23375	0.78	-0.8
5,255,292	+		PFLU_RS23375	0.78	+0.3
5,255,292	+		PFLU_RS23375	0.78	-0.1
5,255,292	+		PFLU_RS23375	0.78	-1.6
5,255,292	+		PFLU_RS23375	0.78	+0.9
5,255,292	+		PFLU_RS23375	0.78	+0.1
5,255,292	+		PFLU_RS23375	0.78	-0.1
5,255,292	+		PFLU_RS23375	0.78	-0.1
5,255,292	+		PFLU_RS23375	0.78	-0.5
5,255,292	+		PFLU_RS23375	0.78	-0.3
5,255,292	+		PFLU_RS23375	0.78	-0.3
5,255,292	+		PFLU_RS23375	0.78	+0.7
5,255,292	+		PFLU_RS23375	0.78	+0.9
5,255,292	+		PFLU_RS23375	0.78	+0.7
5,255,292	+		PFLU_RS23375	0.78	-0.5
5,255,292	+		PFLU_RS23375	0.78	+2.0
5,255,293	-		PFLU_RS23375	0.78	-0.1
5,255,293	-		PFLU_RS23375	0.78	+1.7
5,255,293	-		PFLU_RS23375	0.78	-0.6
5,255,293	-		PFLU_RS23375	0.78	-0.5
5,255,293	-		PFLU_RS23375	0.78	-0.0
5,255,293	-		PFLU_RS23375	0.78	-1.1
5,255,293	-		PFLU_RS23375	0.78	-0.1
5,255,293	-		PFLU_RS23375	0.78	+0.9
5,255,293	-		PFLU_RS23375	0.78	-0.3
5,255,346	+		PFLU_RS23375	0.85	-0.5
5,255,346	+		PFLU_RS23375	0.85	+0.5
5,255,347	-		PFLU_RS23375	0.86	-0.1
5,255,417	+				-1.1
5,255,417	+				-0.4
5,255,418	-				+1.3
5,255,447	+				+0.6
5,255,448	-				-0.9
5,255,448	-				+0.3
5,255,448	-				+0.4
5,255,485	+				+0.3
5,255,488	+				-1.6
5,255,488	+				+0.3
5,255,488	+				+0.5
5,255,488	+				-0.1
5,255,488	+				-0.3
5,255,488	+				+1.0
5,255,488	+				+1.4
5,255,489	-				-0.3
5,255,489	-				+1.1
5,255,489	-				-1.3
5,255,489	-				+1.2
5,255,492	+				+0.3
5,255,492	+				-0.8
5,255,492	+				-0.3
5,255,492	+				-0.3
5,255,492	+				+0.3
5,255,492	+				+2.1
5,255,492	+				+0.9
5,255,492	+				+1.2
5,255,492	+				+0.4
5,255,492	+				-0.7
5,255,493	-				+1.7
5,255,493	-				+2.5
5,255,493	-				+1.3
5,255,493	-				+1.3
5,255,493	-				+2.7
5,255,553	+				+2.5
5,255,554	-				+1.2
5,255,554	-				+2.7