Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS15540
Experiment: CDM1Gut with 50% spent media from Bifidobacterium adolescentis L2-32
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | CDM1Gut with 50% spent media from Bifidobacterium adolescentis L2-32 |
---|---|---|---|---|---|
remove | |||||
1,260,635 | + | +2.0 | |||
1,260,700 | - | -1.1 | |||
1,261,940 | + | +0.6 | |||
1,261,948 | - | +0.9 | |||
1,261,987 | + | -0.1 | |||
1,262,008 | + | -0.7 | |||
1,262,024 | + | +0.2 | |||
1,262,149 | - | BBR_RS15550 | 0.21 | +0.9 | |
1,262,260 | + | BBR_RS15550 | 0.33 | +2.3 | |
1,262,369 | - | BBR_RS15550 | 0.45 | +0.9 | |
1,262,409 | + | BBR_RS15550 | 0.49 | +1.7 |
Or see this region's nucleotide sequence