Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS15530

Experiment: CDM1Gut with 50% spent media from Bifidobacterium adolescentis L2-32

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	CDM1Gut with 50% spent media from Bifidobacterium adolescentis L2-32
1,257,304	-		BBR_RS15525	0.16	+1.2
1,257,331	+		BBR_RS15525	0.19	+0.1
1,257,392	-		BBR_RS15525	0.25	+0.9
1,257,616	+		BBR_RS15525	0.48	-0.1
1,257,616	+		BBR_RS15525	0.48	+0.8
1,257,688	-		BBR_RS15525	0.56	+2.5
1,257,724	+		BBR_RS15525	0.59	+1.0
1,257,739	+		BBR_RS15525	0.61	-0.6
1,257,747	-		BBR_RS15525	0.62	+1.9
1,257,771	+		BBR_RS15525	0.64	+0.9
1,257,784	-		BBR_RS15525	0.66	+0.3
1,257,803	+		BBR_RS15525	0.67	+1.1
1,257,883	+		BBR_RS15525	0.76	-0.1
1,257,928	-		BBR_RS15525	0.80	+0.5
1,257,967	+		BBR_RS15525	0.84	+0.3
1,257,996	-		BBR_RS15525	0.87	-0.9
1,257,996	-		BBR_RS15525	0.87	+0.6
1,257,997	-		BBR_RS15525	0.88	+1.3
1,258,029	-				-0.9
1,258,072	-				-0.1
1,259,300	+				-1.1
1,259,323	-				+1.1
1,259,324	+				+0.5