Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS06280 and PFLU_RS06285 are separated by 211 nucleotides PFLU_RS06285 and PFLU_RS06290 overlap by 4 nucleotides PFLU_RS06290 and PFLU_RS06295 are separated by 17 nucleotides PFLU_RS06295 and PFLU_RS06300 are separated by 0 nucleotides
PFLU_RS06280: PFLU_RS06280 - elongation factor Ts, at 1,407,078 to 1,407,941
_RS06280
PFLU_RS06285: PFLU_RS06285 - UMP kinase, at 1,408,153 to 1,408,896
_RS06285
PFLU_RS06290: PFLU_RS06290 - ribosome recycling factor, at 1,408,893 to 1,409,450
_RS06290
PFLU_RS06295: PFLU_RS06295 - di-trans,poly-cis-decaprenylcistransferase, at 1,409,468 to 1,410,223
_RS06295
PFLU_RS06300: PFLU_RS06300 - phosphatidate cytidylyltransferase, at 1,410,224 to 1,411,030
_RS06300
Position (kb)
1408
1409
1410 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1407.939 kb on + strand at 1407.939 kb on + strand at 1407.939 kb on + strand at 1407.939 kb on + strand at 1408.018 kb on + strand at 1408.018 kb on + strand at 1408.044 kb on + strand at 1408.044 kb on + strand at 1408.044 kb on + strand at 1408.044 kb on + strand at 1408.044 kb on + strand at 1408.044 kb on + strand at 1408.044 kb on + strand at 1408.084 kb on + strand at 1408.084 kb on + strand at 1408.102 kb on + strand at 1408.102 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.446 kb on + strand at 1409.448 kb on + strand at 1410.184 kb on + strand at 1410.221 kb on + strand at 1410.221 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride remove 1,407,939 + -0.0 1,407,939 + -0.6 1,407,939 + +0.3 1,407,939 + +0.6 1,408,018 + +0.1 1,408,018 + -0.2 1,408,044 + -0.8 1,408,044 + -0.5 1,408,044 + +0.1 1,408,044 + +0.4 1,408,044 + -1.7 1,408,044 + -2.5 1,408,044 + -0.3 1,408,084 + -2.2 1,408,084 + +0.4 1,408,102 + -0.3 1,408,102 + +1.0 1,409,446 + -0.5 1,409,446 + -1.4 1,409,446 + -0.2 1,409,446 + +0.5 1,409,446 + -3.0 1,409,446 + -0.2 1,409,446 + -0.5 1,409,446 + +0.0 1,409,446 + -0.9 1,409,446 + -0.7 1,409,446 + -0.2 1,409,446 + -0.7 1,409,446 + +1.2 1,409,446 + -2.1 1,409,446 + +0.8 1,409,446 + -1.5 1,409,448 + +0.7 1,410,184 + +1.1 1,410,221 + -1.2 1,410,221 + -1.9
Or see this region's nucleotide sequence