Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06050
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,270,102 | - | +0.6 | |||
1,270,158 | - | -0.1 | |||
1,270,158 | - | +0.3 | |||
1,270,560 | + | BWI76_RS06045 | 0.49 | +0.3 | |
1,270,568 | - | BWI76_RS06045 | 0.49 | +0.7 | |
1,270,625 | - | BWI76_RS06045 | 0.55 | +0.6 | |
1,270,721 | - | BWI76_RS06045 | 0.64 | -0.7 | |
1,270,736 | - | BWI76_RS06045 | 0.66 | +0.5 | |
1,270,892 | - | BWI76_RS06045 | 0.81 | +0.8 | |
1,271,579 | + | BWI76_RS06050 | 0.38 | +1.0 | |
1,271,579 | - | BWI76_RS06050 | 0.38 | +0.0 | |
1,271,608 | - | BWI76_RS06050 | 0.40 | -0.9 | |
1,271,804 | + | BWI76_RS06050 | 0.55 | +0.2 | |
1,271,951 | - | -0.9 | |||
1,271,990 | - | BWI76_RS06050 | 0.69 | -1.6 | |
1,272,008 | + | BWI76_RS06050 | 0.71 | -0.7 | |
1,272,205 | - | BWI76_RS06050 | 0.86 | +3.4 | |
1,272,238 | - | BWI76_RS06050 | 0.88 | -2.3 | |
1,272,456 | + | -0.1 | |||
1,272,544 | + | +0.7 | |||
1,272,563 | + | +0.2 | |||
1,272,642 | + | BWI76_RS06055 | 0.11 | +0.3 | |
1,272,666 | + | BWI76_RS06055 | 0.12 | +0.6 | |
1,272,721 | + | BWI76_RS06055 | 0.16 | -0.0 | |
1,273,045 | + | BWI76_RS06055 | 0.37 | -0.0 |
Or see this region's nucleotide sequence