Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04915
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,032,184 | + | -0.2 | |||
1,032,320 | + | BWI76_RS04915 | 0.27 | +0.7 | |
1,032,326 | + | BWI76_RS04915 | 0.28 | +1.1 | |
1,032,367 | + | BWI76_RS04915 | 0.40 | -0.5 | |
1,032,367 | + | BWI76_RS04915 | 0.40 | +1.3 | |
1,032,436 | + | BWI76_RS04915 | 0.59 | -0.8 | |
1,032,587 | - | -1.2 | |||
1,032,614 | + | -2.4 | |||
1,032,614 | + | -1.0 | |||
1,032,686 | - | -1.4 | |||
1,032,736 | - | BWI76_RS04920 | 0.15 | -2.0 | |
1,032,744 | - | BWI76_RS04920 | 0.16 | -0.4 | |
1,032,809 | + | BWI76_RS04920 | 0.24 | -0.4 | |
1,032,842 | + | BWI76_RS04920 | 0.28 | +0.8 | |
1,032,927 | - | BWI76_RS04920 | 0.39 | -1.5 | |
1,032,995 | + | BWI76_RS04920 | 0.48 | -0.7 | |
1,033,156 | + | BWI76_RS04920 | 0.68 | +0.1 | |
1,033,321 | + | BWI76_RS04920 | 0.89 | +0.2 | |
1,033,428 | + | -3.0 | |||
1,033,429 | - | +1.6 | |||
1,033,450 | + | -0.4 |
Or see this region's nucleotide sequence