Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00745 and BWI76_RS00750 are separated by 244 nucleotides BWI76_RS00750 and BWI76_RS00755 are separated by 9 nucleotides BWI76_RS00755 and BWI76_RS00760 are separated by 91 nucleotides
BWI76_RS00745: BWI76_RS00745 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 151,100 to 152,026
_RS00745
BWI76_RS00750: BWI76_RS00750 - ATP-dependent protease ATP-binding subunit HslU, at 152,271 to 153,605
_RS00750
BWI76_RS00755: BWI76_RS00755 - ATP-dependent protease subunit HslV, at 153,615 to 154,145
_RS00755
BWI76_RS00760: BWI76_RS00760 - cell division protein FtsN, at 154,237 to 155,211
_RS00760
Position (kb) 152
153
154 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 151.316 kb on - strand, within BWI76_RS00745 at 151.316 kb on - strand, within BWI76_RS00745 at 151.443 kb on + strand, within BWI76_RS00745 at 151.489 kb on + strand, within BWI76_RS00745 at 151.489 kb on + strand, within BWI76_RS00745 at 151.497 kb on - strand, within BWI76_RS00745 at 151.497 kb on - strand, within BWI76_RS00745 at 152.095 kb on + strand at 152.172 kb on + strand at 152.206 kb on - strand at 152.239 kb on + strand at 152.239 kb on + strand at 152.243 kb on - strand at 152.247 kb on - strand at 152.481 kb on + strand, within BWI76_RS00750 at 152.533 kb on + strand, within BWI76_RS00750 at 152.745 kb on - strand, within BWI76_RS00750 at 152.784 kb on - strand, within BWI76_RS00750 at 152.931 kb on - strand, within BWI76_RS00750 at 153.078 kb on - strand, within BWI76_RS00750 at 153.484 kb on - strand at 153.489 kb on - strand at 153.823 kb on + strand, within BWI76_RS00755 at 153.967 kb on + strand, within BWI76_RS00755 at 154.069 kb on + strand, within BWI76_RS00755 at 154.077 kb on - strand, within BWI76_RS00755 at 154.082 kb on - strand, within BWI76_RS00755 at 154.114 kb on - strand at 154.369 kb on - strand, within BWI76_RS00760 at 154.417 kb on - strand, within BWI76_RS00760 at 154.532 kb on + strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.540 kb on - strand, within BWI76_RS00760 at 154.565 kb on - strand, within BWI76_RS00760
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL remove 151,316 - BWI76_RS00745 0.23 -1.0 151,316 - BWI76_RS00745 0.23 +0.3 151,443 + BWI76_RS00745 0.37 +0.1 151,489 + BWI76_RS00745 0.42 +0.6 151,489 + BWI76_RS00745 0.42 -0.5 151,497 - BWI76_RS00745 0.43 +0.2 151,497 - BWI76_RS00745 0.43 -0.7 152,095 + +0.1 152,172 + -0.4 152,206 - -1.4 152,239 + -0.5 152,239 + -0.6 152,243 - +0.2 152,247 - -0.5 152,481 + BWI76_RS00750 0.16 -2.4 152,533 + BWI76_RS00750 0.20 -0.5 152,745 - BWI76_RS00750 0.36 -1.0 152,784 - BWI76_RS00750 0.38 -1.2 152,931 - BWI76_RS00750 0.49 -1.1 153,078 - BWI76_RS00750 0.60 -2.0 153,484 - +0.9 153,489 - -1.3 153,823 + BWI76_RS00755 0.39 -3.3 153,967 + BWI76_RS00755 0.66 -0.4 154,069 + BWI76_RS00755 0.85 -1.5 154,077 - BWI76_RS00755 0.87 -1.5 154,082 - BWI76_RS00755 0.88 -1.1 154,114 - -0.8 154,369 - BWI76_RS00760 0.14 -0.1 154,417 - BWI76_RS00760 0.18 -0.0 154,532 + BWI76_RS00760 0.30 -2.3 154,540 - BWI76_RS00760 0.31 -3.4 154,540 - BWI76_RS00760 0.31 -1.4 154,540 - BWI76_RS00760 0.31 -1.2 154,565 - BWI76_RS00760 0.34 +0.9
Or see this region's nucleotide sequence