Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14570
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,058,017 | + | +0.0 | |||
3,058,022 | + | +0.3 | |||
3,058,025 | - | -0.6 | |||
3,058,025 | - | +1.3 | |||
3,058,034 | - | +0.5 | |||
3,058,071 | + | +0.0 | |||
3,058,117 | - | +0.6 | |||
3,058,248 | - | +0.8 | |||
3,058,257 | - | +1.1 | |||
3,058,266 | + | +0.3 | |||
3,058,282 | + | +0.4 | |||
3,058,318 | + | -0.1 | |||
3,058,353 | - | -1.6 | |||
3,058,387 | + | -1.2 | |||
3,058,596 | - | BWI76_RS14565 | 0.38 | -0.6 | |
3,059,281 | + | BWI76_RS14570 | 0.58 | -0.8 | |
3,059,324 | + | BWI76_RS14570 | 0.66 | -2.3 | |
3,059,353 | - | BWI76_RS14570 | 0.71 | -0.1 | |
3,059,370 | - | BWI76_RS14570 | 0.74 | -0.8 | |
3,059,548 | + | -0.3 | |||
3,059,548 | + | +0.9 | |||
3,059,651 | - | +0.8 | |||
3,059,768 | + | BWI76_RS14575 | 0.25 | +1.5 | |
3,059,982 | - | BWI76_RS14575 | 0.59 | -0.5 | |
3,060,294 | + | -0.5 | |||
3,060,335 | - | BWI76_RS14580 | 0.10 | -0.4 | |
3,060,403 | + | BWI76_RS14580 | 0.18 | -1.0 | |
3,060,411 | - | BWI76_RS14580 | 0.19 | +0.5 | |
3,060,477 | + | BWI76_RS14580 | 0.27 | -0.0 |
Or see this region's nucleotide sequence