Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11675
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,455,110 | - | BWI76_RS11670 | 0.20 | -1.2 | |
2,455,770 | + | BWI76_RS11670 | 0.74 | -0.8 | |
2,455,814 | + | BWI76_RS11670 | 0.78 | +0.1 | |
2,455,817 | - | BWI76_RS11670 | 0.78 | +0.1 | |
2,455,869 | - | BWI76_RS11670 | 0.83 | -0.3 | |
2,455,910 | + | BWI76_RS11670 | 0.86 | +0.3 | |
2,455,910 | + | BWI76_RS11670 | 0.86 | -0.3 | |
2,455,910 | + | BWI76_RS11670 | 0.86 | +0.5 | |
2,455,910 | + | BWI76_RS11670 | 0.86 | +0.1 | |
2,455,910 | + | BWI76_RS11670 | 0.86 | +0.4 | |
2,456,367 | + | BWI76_RS11675 | 0.28 | +1.3 | |
2,456,375 | + | BWI76_RS11675 | 0.29 | +3.8 | |
2,456,997 | - | BWI76_RS11675 | 0.89 | +1.4 | |
2,457,686 | + | BWI76_RS11680 | 0.39 | +0.3 | |
2,457,686 | + | BWI76_RS11680 | 0.39 | +0.5 | |
2,457,694 | - | BWI76_RS11680 | 0.40 | +0.3 |
Or see this region's nucleotide sequence