Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08795
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,853,856 | - | BWI76_RS08790 | 0.10 | -0.6 | |
1,853,876 | + | BWI76_RS08790 | 0.12 | -1.3 | |
1,854,135 | - | BWI76_RS08790 | 0.36 | -1.2 | |
1,854,340 | + | BWI76_RS08790 | 0.54 | -1.7 | |
1,854,340 | + | BWI76_RS08790 | 0.54 | -1.0 | |
1,854,370 | - | BWI76_RS08790 | 0.57 | -0.6 | |
1,854,619 | + | BWI76_RS08790 | 0.80 | -0.6 | |
1,854,629 | - | BWI76_RS08790 | 0.81 | -1.1 | |
1,854,638 | + | BWI76_RS08790 | 0.81 | +2.4 | |
1,854,821 | - | -0.4 | |||
1,854,851 | - | -0.6 | |||
1,854,893 | - | -0.5 | |||
1,854,929 | + | BWI76_RS08795 | 0.12 | -1.7 | |
1,854,937 | - | BWI76_RS08795 | 0.14 | -1.7 | |
1,854,952 | + | BWI76_RS08795 | 0.16 | -1.7 | |
1,855,344 | + | BWI76_RS08795 | 0.74 | -1.1 | |
1,855,586 | - | +1.0 | |||
1,855,839 | - | BWI76_RS08800 | 0.20 | -0.1 | |
1,856,083 | - | BWI76_RS08800 | 0.35 | -0.4 | |
1,856,122 | + | BWI76_RS08800 | 0.37 | +0.2 |
Or see this region's nucleotide sequence