Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04905
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,026,944 | - | BWI76_RS04900 | 0.30 | +0.3 | |
1,027,291 | - | BWI76_RS04900 | 0.74 | -0.7 | |
1,027,562 | - | -1.5 | |||
1,027,630 | - | +1.5 | |||
1,027,667 | - | BWI76_RS04905 | 0.10 | -1.1 | |
1,027,786 | + | BWI76_RS04905 | 0.18 | +0.5 | |
1,028,048 | - | BWI76_RS04905 | 0.34 | -0.6 | |
1,028,268 | + | BWI76_RS04905 | 0.48 | -0.1 | |
1,028,712 | - | BWI76_RS04905 | 0.76 | +0.1 | |
1,028,831 | - | BWI76_RS04905 | 0.83 | +1.1 | |
1,028,846 | + | BWI76_RS04905 | 0.84 | -0.6 | |
1,028,926 | - | BWI76_RS04905 | 0.89 | +0.3 | |
1,028,926 | - | BWI76_RS04905 | 0.89 | -0.5 | |
1,028,926 | - | BWI76_RS04905 | 0.89 | +0.1 | |
1,028,962 | - | -2.6 | |||
1,029,131 | + | +1.2 | |||
1,029,241 | + | +0.7 | |||
1,029,249 | - | -1.9 | |||
1,029,276 | - | +0.6 |
Or see this region's nucleotide sequence