Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20710
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,330,980 | + | BWI76_RS20705 | 0.32 | -2.2 | |
4,331,072 | - | BWI76_RS20705 | 0.41 | -0.4 | |
4,331,253 | + | BWI76_RS20705 | 0.58 | -1.8 | |
4,331,340 | - | BWI76_RS20705 | 0.67 | -1.6 | |
4,331,370 | - | BWI76_RS20705 | 0.70 | -0.4 | |
4,331,440 | - | BWI76_RS20705 | 0.77 | -1.4 | |
4,331,509 | + | BWI76_RS20705 | 0.84 | +0.2 | |
4,331,586 | + | -2.5 | |||
4,331,737 | + | -1.3 | |||
4,331,874 | + | -2.6 | |||
4,331,916 | - | +0.4 | |||
4,332,025 | - | -1.0 | |||
4,332,106 | + | BWI76_RS20710 | 0.23 | -0.7 | |
4,332,157 | - | BWI76_RS20710 | 0.29 | +0.1 | |
4,332,157 | - | BWI76_RS20710 | 0.29 | +1.0 | |
4,332,245 | - | BWI76_RS20710 | 0.39 | -0.4 | |
4,332,251 | + | BWI76_RS20710 | 0.40 | -0.0 | |
4,332,392 | + | BWI76_RS20710 | 0.55 | +1.2 | |
4,332,482 | - | BWI76_RS20710 | 0.65 | -1.4 | |
4,333,346 | + | BWI76_RS20715 | 0.79 | -1.3 | |
4,333,453 | - | -0.5 | |||
4,333,570 | - | -2.4 | |||
4,333,570 | - | -0.2 |
Or see this region's nucleotide sequence