Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10710
Experiment: Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,262,473 | + | -4.3 | |||
2,262,543 | + | BWI76_RS10705 | 0.13 | -4.7 | |
2,262,563 | + | BWI76_RS10705 | 0.15 | -2.2 | |
2,262,639 | - | BWI76_RS10705 | 0.25 | -1.2 | |
2,262,796 | - | BWI76_RS10705 | 0.46 | +0.1 | |
2,262,916 | + | BWI76_RS10705 | 0.61 | -1.0 | |
2,262,928 | + | BWI76_RS10705 | 0.63 | -1.4 | |
2,263,134 | + | -2.3 | |||
2,263,506 | + | -0.2 | |||
2,263,506 | + | +0.7 | |||
2,264,061 | + | BWI76_RS10710 | 0.45 | -1.3 | |
2,264,127 | + | BWI76_RS10710 | 0.50 | -1.7 | |
2,264,135 | + | BWI76_RS10710 | 0.50 | -3.2 | |
2,264,266 | + | BWI76_RS10710 | 0.59 | -1.9 | |
2,264,645 | + | BWI76_RS10710 | 0.86 | -2.8 | |
2,264,650 | + | BWI76_RS10710 | 0.86 | -2.2 | |
2,264,949 | + | -2.2 | |||
2,264,949 | + | -3.3 | |||
2,264,990 | - | -3.6 | |||
2,264,994 | + | -0.1 | |||
2,265,219 | + | -1.0 | |||
2,265,219 | + | +1.2 | |||
2,265,260 | - | -1.3 | |||
2,265,446 | + | BWI76_RS10720 | 0.18 | +0.6 | |
2,265,522 | - | BWI76_RS10720 | 0.24 | -1.7 | |
2,265,582 | - | BWI76_RS10720 | 0.28 | -0.2 | |
2,265,602 | - | BWI76_RS10720 | 0.30 | -0.2 |
Or see this region's nucleotide sequence