Experiment: R2A with Vogels_fungal_media 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS13750 and HSERO_RS13755 are separated by 1 nucleotides HSERO_RS13755 and HSERO_RS13760 are separated by 12 nucleotides
HSERO_RS13750: HSERO_RS13750 - chromosome partitioning ATPase, at 3,125,270 to 3,126,310
_RS13750
HSERO_RS13755: HSERO_RS13755 - hypothetical protein, at 3,126,312 to 3,127,820
_RS13755
HSERO_RS13760: HSERO_RS13760 - ATPase, at 3,127,833 to 3,128,840
_RS13760
Position (kb) 3126
3127
3128 Strain fitness (log2 ratio) -1
0
1 at 3125.371 kb on + strand at 3125.449 kb on + strand, within HSERO_RS13750 at 3125.451 kb on + strand, within HSERO_RS13750 at 3125.688 kb on - strand, within HSERO_RS13750 at 3126.104 kb on - strand, within HSERO_RS13750 at 3126.208 kb on + strand at 3126.216 kb on - strand at 3126.216 kb on - strand at 3126.293 kb on - strand at 3126.405 kb on + strand at 3126.406 kb on + strand at 3126.414 kb on - strand at 3126.649 kb on + strand, within HSERO_RS13755 at 3126.725 kb on + strand, within HSERO_RS13755 at 3126.733 kb on - strand, within HSERO_RS13755 at 3126.891 kb on + strand, within HSERO_RS13755 at 3127.070 kb on - strand at 3127.070 kb on - strand at 3127.135 kb on - strand, within HSERO_RS13755 at 3127.165 kb on + strand, within HSERO_RS13755 at 3127.448 kb on + strand, within HSERO_RS13755 at 3127.518 kb on + strand, within HSERO_RS13755 at 3127.518 kb on + strand, within HSERO_RS13755 at 3127.748 kb on + strand at 3127.795 kb on + strand at 3127.988 kb on - strand, within HSERO_RS13760 at 3128.030 kb on + strand, within HSERO_RS13760 at 3128.048 kb on - strand, within HSERO_RS13760 at 3128.085 kb on + strand, within HSERO_RS13760 at 3128.112 kb on + strand, within HSERO_RS13760 at 3128.308 kb on + strand, within HSERO_RS13760 at 3128.316 kb on - strand, within HSERO_RS13760
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Vogels_fungal_media 0.2X remove 3,125,371 + -0.4 3,125,449 + HSERO_RS13750 0.17 +0.4 3,125,451 + HSERO_RS13750 0.17 +0.2 3,125,688 - HSERO_RS13750 0.40 +0.4 3,126,104 - HSERO_RS13750 0.80 +0.4 3,126,208 + -0.2 3,126,216 - -0.8 3,126,216 - +0.5 3,126,293 - +0.4 3,126,405 + -0.7 3,126,406 + +0.9 3,126,414 - -0.1 3,126,649 + HSERO_RS13755 0.22 +0.1 3,126,725 + HSERO_RS13755 0.27 -0.6 3,126,733 - HSERO_RS13755 0.28 +0.1 3,126,891 + HSERO_RS13755 0.38 +0.4 3,127,070 - +0.9 3,127,070 - -1.2 3,127,135 - HSERO_RS13755 0.55 +1.0 3,127,165 + HSERO_RS13755 0.57 +0.3 3,127,448 + HSERO_RS13755 0.75 +1.2 3,127,518 + HSERO_RS13755 0.80 +0.3 3,127,518 + HSERO_RS13755 0.80 +1.1 3,127,748 + -0.4 3,127,795 + +0.2 3,127,988 - HSERO_RS13760 0.15 -0.2 3,128,030 + HSERO_RS13760 0.20 +0.2 3,128,048 - HSERO_RS13760 0.21 +0.0 3,128,085 + HSERO_RS13760 0.25 +0.1 3,128,112 + HSERO_RS13760 0.28 -0.3 3,128,308 + HSERO_RS13760 0.47 +0.3 3,128,316 - HSERO_RS13760 0.48 -0.3
Or see this region's nucleotide sequence