Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17885
Experiment: Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,718,667 | - | BWI76_RS17880 | 0.44 | -0.1 | |
3,718,890 | - | BWI76_RS17880 | 0.59 | -0.5 | |
3,718,952 | - | BWI76_RS17880 | 0.63 | +0.2 | |
3,719,698 | - | -0.3 | |||
3,719,782 | + | BWI76_RS17885 | 0.13 | +0.1 | |
3,719,966 | + | BWI76_RS17885 | 0.25 | -2.7 | |
3,720,192 | - | BWI76_RS17885 | 0.40 | -0.2 | |
3,720,228 | - | BWI76_RS17885 | 0.42 | +0.2 | |
3,720,252 | - | BWI76_RS17885 | 0.44 | -0.7 | |
3,720,345 | - | BWI76_RS17885 | 0.49 | +1.1 | |
3,720,559 | + | BWI76_RS17885 | 0.63 | -0.3 | |
3,720,615 | + | BWI76_RS17885 | 0.67 | +0.3 | |
3,720,786 | + | BWI76_RS17885 | 0.78 | -0.9 | |
3,721,179 | - | -0.1 | |||
3,721,263 | + | -0.0 | |||
3,721,276 | + | -0.2 | |||
3,721,282 | + | -0.3 | |||
3,721,375 | - | -2.4 | |||
3,721,460 | - | +0.3 | |||
3,721,487 | + | +0.4 | |||
3,721,535 | + | -1.6 | |||
3,721,543 | - | +0.0 | |||
3,721,543 | - | -1.0 | |||
3,721,571 | + | -0.9 | |||
3,721,700 | + | BWI76_RS17890 | 0.12 | +0.5 | |
3,721,880 | + | BWI76_RS17890 | 0.31 | +0.8 | |
3,722,048 | + | BWI76_RS17890 | 0.48 | -0.0 |
Or see this region's nucleotide sequence