Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06235
Experiment: Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,307,514 | - | -0.4 | |||
1,307,514 | - | +0.8 | |||
1,307,530 | + | +0.3 | |||
1,307,540 | - | -1.1 | |||
1,307,567 | + | -0.7 | |||
1,307,575 | - | -0.2 | |||
1,307,707 | + | -0.5 | |||
1,307,707 | + | +0.5 | |||
1,307,707 | + | -1.0 | |||
1,307,855 | + | BWI76_RS06230 | 0.16 | +2.4 | |
1,307,865 | + | BWI76_RS06230 | 0.18 | +0.2 | |
1,307,933 | + | BWI76_RS06230 | 0.28 | +0.2 | |
1,308,435 | + | +0.3 | |||
1,308,444 | + | +0.1 | |||
1,308,454 | + | +0.2 | |||
1,308,850 | - | BWI76_RS06235 | 0.31 | -0.1 | |
1,309,114 | + | BWI76_RS06235 | 0.51 | +1.7 | |
1,309,256 | - | BWI76_RS06235 | 0.62 | +0.8 | |
1,309,312 | + | BWI76_RS06235 | 0.67 | -0.1 | |
1,309,374 | - | BWI76_RS06235 | 0.71 | -2.3 | |
1,309,654 | + | +0.6 | |||
1,309,657 | - | +0.5 | |||
1,309,699 | + | +0.3 | |||
1,309,814 | + | +0.4 | |||
1,309,961 | + | -0.7 | |||
1,310,003 | - | +0.4 | |||
1,310,122 | - | -0.3 | |||
1,310,139 | + | -0.7 | |||
1,310,203 | + | -0.3 | |||
1,310,211 | + | -0.7 | |||
1,310,281 | + | -1.7 | |||
1,310,281 | + | -1.2 | |||
1,310,350 | + | BWI76_RS06240 | 0.14 | -0.0 | |
1,310,538 | - | BWI76_RS06240 | 0.28 | -1.5 |
Or see this region's nucleotide sequence