Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23220
Experiment: Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,836,246 | + | BWI76_RS23215 | 0.52 | -0.6 | |
4,836,329 | + | BWI76_RS23215 | 0.58 | +0.5 | |
4,836,364 | - | BWI76_RS23215 | 0.61 | -1.4 | |
4,836,448 | + | BWI76_RS23215 | 0.68 | +1.1 | |
4,836,448 | + | BWI76_RS23215 | 0.68 | +2.4 | |
4,836,499 | + | BWI76_RS23215 | 0.72 | +0.5 | |
4,836,903 | + | +0.1 | |||
4,836,923 | + | +0.4 | |||
4,837,004 | + | -0.9 | |||
4,837,458 | - | BWI76_RS23220 | 0.28 | -3.0 | |
4,837,462 | - | BWI76_RS23220 | 0.29 | -5.0 | |
4,837,491 | + | BWI76_RS23220 | 0.31 | -3.4 | |
4,837,491 | + | BWI76_RS23220 | 0.31 | -2.8 | |
4,837,499 | - | BWI76_RS23220 | 0.31 | -5.3 | |
4,837,499 | - | BWI76_RS23220 | 0.31 | -6.3 | |
4,837,631 | + | BWI76_RS23220 | 0.41 | -3.1 | |
4,837,644 | - | BWI76_RS23220 | 0.42 | -5.3 | |
4,838,047 | - | BWI76_RS23220 | 0.73 | -1.9 | |
4,838,141 | - | BWI76_RS23220 | 0.80 | -3.2 | |
4,838,516 | + | +0.3 | |||
4,838,516 | + | +0.9 | |||
4,838,561 | + | -3.4 | |||
4,838,624 | - | -1.1 | |||
4,838,649 | - | BWI76_RS23225 | 0.11 | +0.0 | |
4,838,700 | + | BWI76_RS23225 | 0.13 | +0.4 | |
4,839,068 | - | BWI76_RS23225 | 0.33 | +0.6 | |
4,839,150 | - | BWI76_RS23225 | 0.38 | -0.3 | |
4,839,411 | + | BWI76_RS23225 | 0.52 | -1.1 |
Or see this region's nucleotide sequence