Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15420

Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
3,229,594	-		BWI76_RS15415	0.40	+0.3
3,230,228	+				+0.9
3,230,319	-				+3.9
3,230,489	+				+0.3
3,231,563	-		BWI76_RS15420	0.36	+0.1
3,231,657	+		BWI76_RS15420	0.39	-0.5
3,231,657	+		BWI76_RS15420	0.39	-0.5
3,231,657	+		BWI76_RS15420	0.39	+0.3
3,231,675	-		BWI76_RS15420	0.40	-0.2
3,232,163	+		BWI76_RS15420	0.55	-0.3
3,232,173	+		BWI76_RS15420	0.56	-1.7
3,232,665	+		BWI76_RS15420	0.72	-0.6
3,233,193	+		BWI76_RS15420	0.89	+0.3
3,233,246	-				+0.1
3,233,356	+				-1.1
3,233,364	-				+0.2
3,233,367	-				-0.3
3,233,374	+				+1.0
3,233,381	-				+0.7
3,233,446	-				+0.5
3,233,446	-				-0.1
3,233,467	+				-0.3
3,233,467	+				-0.3
3,233,467	+				-0.0
3,233,467	+				-1.9
3,233,467	+				-0.1
3,233,467	+				-0.6
3,233,467	+				+1.0
3,233,467	+				+0.9
3,233,469	+				-1.1
3,233,469	+				+0.0
3,233,469	+				+0.4
3,233,475	-				-2.4
3,233,485	-				-0.8
3,233,486	+				+0.9
3,233,503	+				-0.4
3,233,511	-				-0.5
3,233,511	-				-0.2
3,233,534	+				+0.4
3,233,565	+				+0.4
3,233,573	-				+0.1
3,233,579	+				-0.2
3,233,610	-				-0.3
3,233,611	+				+0.8
3,233,612	+				-0.2
3,233,612	+				-2.1
3,233,612	+				+2.9
3,233,620	-				+0.2
3,233,620	-				-2.4
3,233,620	-				+0.2
3,233,620	-				-2.0
3,233,762	-		BWI76_RS15425	0.13	+0.1
3,233,824	+		BWI76_RS15425	0.18	-1.0
3,233,832	-		BWI76_RS15425	0.18	+0.3
3,233,842	-		BWI76_RS15425	0.19	-0.3
3,233,950	+		BWI76_RS15425	0.28	+0.1
3,233,950	+		BWI76_RS15425	0.28	+0.2
3,233,950	+				+0.9
3,233,950	+		BWI76_RS15425	0.28	+0.5
3,233,950	+		BWI76_RS15425	0.28	-0.4
3,233,950	+		BWI76_RS15425	0.28	+0.6
3,233,950	+		BWI76_RS15425	0.28	-1.4
3,233,950	+		BWI76_RS15425	0.28	+1.7
3,233,950	+		BWI76_RS15425	0.28	+0.4
3,233,950	+		BWI76_RS15425	0.28	-1.1
3,233,950	+		BWI76_RS15425	0.28	-0.1
3,233,950	+		BWI76_RS15425	0.28	-2.1
3,233,950	+		BWI76_RS15425	0.28	-1.9
3,233,950	+		BWI76_RS15425	0.28	-2.1
3,233,950	+		BWI76_RS15425	0.28	+0.9
3,233,950	+		BWI76_RS15425	0.28	-2.5
3,233,950	+		BWI76_RS15425	0.28	-1.1
3,233,950	+		BWI76_RS15425	0.28	-0.1
3,233,950	+		BWI76_RS15425	0.28	-1.7
3,233,950	+		BWI76_RS15425	0.28	-1.1
3,233,950	+				+0.9
3,233,958	-				+0.9
3,233,958	-		BWI76_RS15425	0.28	-0.7
3,233,958	-		BWI76_RS15425	0.28	-2.2
3,233,958	-		BWI76_RS15425	0.28	+0.5
3,233,958	-				-0.1
3,233,958	-		BWI76_RS15425	0.28	-0.7
3,233,958	-		BWI76_RS15425	0.28	-3.8
3,233,958	-		BWI76_RS15425	0.28	+0.5
3,233,958	-		BWI76_RS15425	0.28	-0.4
3,233,958	-		BWI76_RS15425	0.28	+1.9
3,233,958	-		BWI76_RS15425	0.28	+1.4
3,233,958	-		BWI76_RS15425	0.28	-0.7
3,233,958	-		BWI76_RS15425	0.28	+1.9
3,233,958	-		BWI76_RS15425	0.28	-2.4
3,233,980	+		BWI76_RS15425	0.30	-0.2
3,233,988	-		BWI76_RS15425	0.31	-0.1
3,233,988	-		BWI76_RS15425	0.31	+1.0
3,233,991	+		BWI76_RS15425	0.31	-1.9
3,233,994	-		BWI76_RS15425	0.31	-0.2
3,233,996	+		BWI76_RS15425	0.31	-1.1
3,233,996	+		BWI76_RS15425	0.31	-0.7
3,234,004	-		BWI76_RS15425	0.32	-2.3
3,234,039	+		BWI76_RS15425	0.35	+1.3
3,234,061	+		BWI76_RS15425	0.37	+2.6
3,234,162	+		BWI76_RS15425	0.45	+0.6
3,234,175	-		BWI76_RS15425	0.46	-1.1
3,234,186	-		BWI76_RS15425	0.47	+0.2
3,234,206	+		BWI76_RS15425	0.48	-1.2
3,234,223	+		BWI76_RS15425	0.49	-0.0
3,234,223	+		BWI76_RS15425	0.49	-3.6
3,234,231	+		BWI76_RS15425	0.50	-0.7
3,234,231	+		BWI76_RS15425	0.50	-0.9
3,234,231	+		BWI76_RS15425	0.50	-0.2
3,234,231	+		BWI76_RS15425	0.50	-0.0
3,234,231	+		BWI76_RS15425	0.50	-1.7
3,234,239	-		BWI76_RS15425	0.51	-1.1
3,234,239	-		BWI76_RS15425	0.51	-0.4
3,234,239	-		BWI76_RS15425	0.51	-0.6
3,234,239	-		BWI76_RS15425	0.51	-2.1
3,234,249	-		BWI76_RS15425	0.52	+0.9
3,234,330	-		BWI76_RS15425	0.58	-0.4
3,234,376	+		BWI76_RS15425	0.62	-1.3
3,234,384	-		BWI76_RS15425	0.62	+0.0
3,234,384	-		BWI76_RS15425	0.62	-1.5
3,234,388	+		BWI76_RS15425	0.63	-0.7
3,234,396	+		BWI76_RS15425	0.63	-2.4
3,234,396	-		BWI76_RS15425	0.63	+0.5
3,234,396	-		BWI76_RS15425	0.63	-0.6
3,234,396	-		BWI76_RS15425	0.63	-1.3
3,234,396	-		BWI76_RS15425	0.63	+0.9
3,234,423	+		BWI76_RS15425	0.65	+0.2
3,234,423	+		BWI76_RS15425	0.65	-3.5
3,234,431	-		BWI76_RS15425	0.66	-0.6
3,234,431	-		BWI76_RS15425	0.66	-0.7
3,234,509	+		BWI76_RS15425	0.72	-2.0
3,234,537	+		BWI76_RS15425	0.75	-1.8