Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14480 and BWI76_RS14485 overlap by 11 nucleotides BWI76_RS14485 and BWI76_RS14490 overlap by 4 nucleotides
BWI76_RS14480: BWI76_RS14480 - hypothetical protein, at 3,022,174 to 3,023,424
_RS14480
BWI76_RS14485: BWI76_RS14485 - two-component sensor histidine kinase, at 3,023,414 to 3,025,423
_RS14485
BWI76_RS14490: BWI76_RS14490 - ABC transporter substrate-binding protein, at 3,025,420 to 3,026,691
_RS14490
Position (kb)
3023
3024
3025
3026 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3022.421 kb on - strand, within BWI76_RS14480 at 3022.484 kb on + strand, within BWI76_RS14480 at 3022.592 kb on + strand, within BWI76_RS14480 at 3022.698 kb on + strand, within BWI76_RS14480 at 3022.838 kb on - strand, within BWI76_RS14480 at 3023.077 kb on - strand, within BWI76_RS14480 at 3023.265 kb on + strand, within BWI76_RS14480 at 3023.273 kb on - strand, within BWI76_RS14480 at 3023.366 kb on - strand at 3023.536 kb on + strand at 3023.841 kb on - strand, within BWI76_RS14485 at 3023.853 kb on - strand, within BWI76_RS14485 at 3023.881 kb on - strand, within BWI76_RS14485 at 3024.096 kb on + strand, within BWI76_RS14485 at 3024.161 kb on - strand, within BWI76_RS14485 at 3024.162 kb on + strand, within BWI76_RS14485 at 3024.188 kb on + strand, within BWI76_RS14485 at 3024.302 kb on - strand, within BWI76_RS14485 at 3024.910 kb on + strand at 3025.108 kb on - strand, within BWI76_RS14485 at 3025.153 kb on + strand, within BWI76_RS14485 at 3025.161 kb on - strand, within BWI76_RS14485 at 3025.502 kb on + strand at 3025.573 kb on + strand at 3025.842 kb on + strand, within BWI76_RS14490 at 3026.051 kb on - strand, within BWI76_RS14490 at 3026.114 kb on - strand, within BWI76_RS14490 at 3026.237 kb on + strand, within BWI76_RS14490
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 3,022,421 - BWI76_RS14480 0.20 -3.4 3,022,484 + BWI76_RS14480 0.25 -2.1 3,022,592 + BWI76_RS14480 0.33 +0.0 3,022,698 + BWI76_RS14480 0.42 +1.4 3,022,838 - BWI76_RS14480 0.53 +1.3 3,023,077 - BWI76_RS14480 0.72 +0.8 3,023,265 + BWI76_RS14480 0.87 +0.3 3,023,273 - BWI76_RS14480 0.88 -0.4 3,023,366 - +0.5 3,023,536 + +0.9 3,023,841 - BWI76_RS14485 0.21 -1.4 3,023,853 - BWI76_RS14485 0.22 +0.6 3,023,881 - BWI76_RS14485 0.23 -0.9 3,024,096 + BWI76_RS14485 0.34 +0.8 3,024,161 - BWI76_RS14485 0.37 -1.6 3,024,162 + BWI76_RS14485 0.37 +0.1 3,024,188 + BWI76_RS14485 0.39 +0.1 3,024,302 - BWI76_RS14485 0.44 +0.5 3,024,910 + +1.2 3,025,108 - BWI76_RS14485 0.84 -0.3 3,025,153 + BWI76_RS14485 0.87 -0.9 3,025,161 - BWI76_RS14485 0.87 -2.4 3,025,502 + -0.1 3,025,573 + -0.2 3,025,842 + BWI76_RS14490 0.33 -0.1 3,026,051 - BWI76_RS14490 0.50 +0.1 3,026,114 - BWI76_RS14490 0.55 -1.0 3,026,237 + BWI76_RS14490 0.64 -0.8
Or see this region's nucleotide sequence