Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14460 and BWI76_RS14465 are separated by 329 nucleotides BWI76_RS14465 and BWI76_RS14470 are separated by 67 nucleotides
BWI76_RS14460: BWI76_RS14460 - MurR/RpiR family transcriptional regulator, at 3,017,412 to 3,018,269
_RS14460
BWI76_RS14465: BWI76_RS14465 - transcriptional regulator, at 3,018,599 to 3,019,042
_RS14465
BWI76_RS14470: BWI76_RS14470 - L-serine ammonia-lyase, at 3,019,110 to 3,020,477
_RS14470
Position (kb)
3018
3019
3020 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3017.972 kb on - strand, within BWI76_RS14460 at 3018.128 kb on + strand, within BWI76_RS14460 at 3018.128 kb on + strand, within BWI76_RS14460 at 3018.223 kb on + strand at 3018.286 kb on - strand at 3018.324 kb on - strand at 3018.375 kb on - strand at 3018.387 kb on - strand at 3018.395 kb on - strand at 3018.422 kb on - strand at 3018.614 kb on + strand at 3018.617 kb on - strand at 3018.617 kb on - strand at 3018.643 kb on + strand at 3018.671 kb on + strand, within BWI76_RS14465 at 3018.671 kb on + strand, within BWI76_RS14465 at 3018.726 kb on + strand, within BWI76_RS14465 at 3018.759 kb on + strand, within BWI76_RS14465 at 3018.967 kb on + strand, within BWI76_RS14465 at 3018.968 kb on + strand, within BWI76_RS14465 at 3018.970 kb on + strand, within BWI76_RS14465 at 3018.983 kb on + strand, within BWI76_RS14465 at 3018.983 kb on + strand, within BWI76_RS14465 at 3018.983 kb on + strand, within BWI76_RS14465 at 3018.991 kb on - strand, within BWI76_RS14465 at 3019.003 kb on - strand at 3019.004 kb on - strand at 3019.050 kb on + strand at 3019.218 kb on - strand at 3019.443 kb on + strand, within BWI76_RS14470 at 3019.500 kb on - strand, within BWI76_RS14470 at 3019.684 kb on + strand at 3019.759 kb on - strand, within BWI76_RS14470 at 3019.924 kb on + strand, within BWI76_RS14470 at 3019.947 kb on - strand, within BWI76_RS14470 at 3019.950 kb on + strand, within BWI76_RS14470 at 3020.024 kb on + strand, within BWI76_RS14470
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 3,017,972 - BWI76_RS14460 0.65 -0.4 3,018,128 + BWI76_RS14460 0.83 +1.1 3,018,128 + BWI76_RS14460 0.83 -2.6 3,018,223 + -0.4 3,018,286 - +0.4 3,018,324 - -0.6 3,018,375 - -0.2 3,018,387 - -0.3 3,018,395 - +0.4 3,018,422 - -0.7 3,018,614 + -0.8 3,018,617 - -0.3 3,018,617 - -2.5 3,018,643 + +0.3 3,018,671 + BWI76_RS14465 0.16 -0.9 3,018,671 + BWI76_RS14465 0.16 -2.5 3,018,726 + BWI76_RS14465 0.29 +2.0 3,018,759 + BWI76_RS14465 0.36 -1.2 3,018,967 + BWI76_RS14465 0.83 +0.4 3,018,968 + BWI76_RS14465 0.83 -0.8 3,018,970 + BWI76_RS14465 0.84 +0.1 3,018,983 + BWI76_RS14465 0.86 +1.2 3,018,983 + BWI76_RS14465 0.86 -0.4 3,018,983 + BWI76_RS14465 0.86 -0.2 3,018,991 - BWI76_RS14465 0.88 -0.0 3,019,003 - -0.1 3,019,004 - -0.8 3,019,050 + -0.4 3,019,218 - -0.5 3,019,443 + BWI76_RS14470 0.24 -1.5 3,019,500 - BWI76_RS14470 0.29 -0.4 3,019,684 + -1.5 3,019,759 - BWI76_RS14470 0.47 -1.8 3,019,924 + BWI76_RS14470 0.60 +0.4 3,019,947 - BWI76_RS14470 0.61 -1.2 3,019,950 + BWI76_RS14470 0.61 -2.6 3,020,024 + BWI76_RS14470 0.67 -1.0
Or see this region's nucleotide sequence