Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05620

Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
1,177,602	+		BWI76_RS05615	0.55	+0.9
1,177,602	+		BWI76_RS05615	0.55	-0.4
1,177,610	-		BWI76_RS05615	0.55	-0.5
1,177,610	-		BWI76_RS05615	0.55	+0.9
1,177,626	+		BWI76_RS05615	0.56	+0.9
1,177,671	+		BWI76_RS05615	0.59	+0.3
1,177,686	-		BWI76_RS05615	0.61	+0.1
1,177,689	-		BWI76_RS05615	0.61	+0.1
1,177,691	+		BWI76_RS05615	0.61	+0.4
1,177,699	-		BWI76_RS05615	0.61	+0.2
1,177,701	+		BWI76_RS05615	0.62	-2.8
1,177,709	-		BWI76_RS05615	0.62	-0.8
1,177,716	-		BWI76_RS05615	0.63	-0.9
1,177,738	+		BWI76_RS05615	0.64	-0.3
1,177,739	+		BWI76_RS05615	0.64	-0.0
1,177,746	+		BWI76_RS05615	0.65	+1.5
1,177,746	+		BWI76_RS05615	0.65	+2.7
1,177,746	-		BWI76_RS05615	0.65	-1.4
1,177,747	+		BWI76_RS05615	0.65	-0.2
1,177,747	+		BWI76_RS05615	0.65	-2.1
1,177,747	+		BWI76_RS05615	0.65	-0.1
1,177,747	+		BWI76_RS05615	0.65	-0.7
1,177,747	+		BWI76_RS05615	0.65	+0.3
1,177,747	+		BWI76_RS05615	0.65	-1.2
1,177,747	+		BWI76_RS05615	0.65	-2.6
1,177,747	+		BWI76_RS05615	0.65	+0.8
1,177,754	-		BWI76_RS05615	0.65	-0.3
1,177,754	-		BWI76_RS05615	0.65	-0.9
1,177,754	-		BWI76_RS05615	0.65	-2.4
1,177,754	-		BWI76_RS05615	0.65	-3.6
1,177,756	+		BWI76_RS05615	0.66	-2.6
1,177,764	-		BWI76_RS05615	0.66	-2.9
1,177,783	+		BWI76_RS05615	0.67	-1.4
1,177,790	+		BWI76_RS05615	0.68	-1.4
1,177,790	+		BWI76_RS05615	0.68	+0.9
1,177,790	+		BWI76_RS05615	0.68	-1.0
1,177,791	-				-0.1
1,177,791	-				+0.2
1,177,791	-		BWI76_RS05615	0.68	-0.6
1,177,792	+		BWI76_RS05615	0.68	-2.4
1,177,840	-		BWI76_RS05615	0.72	-1.8
1,177,840	-		BWI76_RS05615	0.72	-0.1
1,177,840	-		BWI76_RS05615	0.72	-1.1
1,177,883	-		BWI76_RS05615	0.75	-0.4
1,177,909	+		BWI76_RS05615	0.76	-0.1
1,177,912	+		BWI76_RS05615	0.77	-0.1
1,177,931	-		BWI76_RS05615	0.78	-2.4
1,177,950	-		BWI76_RS05615	0.79	-0.1
1,177,992	+		BWI76_RS05615	0.82	+0.0
1,177,992	+		BWI76_RS05615	0.82	-0.1
1,177,992	+		BWI76_RS05615	0.82	-1.1
1,178,000	-		BWI76_RS05615	0.83	+0.9
1,178,028	+		BWI76_RS05615	0.85	+0.0
1,178,028	+		BWI76_RS05615	0.85	+1.1
1,178,036	-		BWI76_RS05615	0.85	-1.8
1,178,043	+		BWI76_RS05615	0.86	+0.7
1,178,043	+		BWI76_RS05615	0.86	+0.3
1,178,043	+				+0.9
1,178,043	+		BWI76_RS05615	0.86	-1.4
1,178,043	+		BWI76_RS05615	0.86	-0.1
1,178,043	+		BWI76_RS05615	0.86	-2.1
1,178,046	-		BWI76_RS05615	0.86	-0.7
1,178,046	-		BWI76_RS05615	0.86	-0.0
1,178,051	-		BWI76_RS05615	0.87	+0.9
1,178,105	+				-0.9
1,178,109	-				-1.1
1,178,113	-				+0.8
1,178,115	+				+0.9
1,178,115	+				+0.4
1,178,122	-				-0.1
1,178,218	+				+0.1
1,178,258	-				-0.2
1,178,258	-				-1.9
1,178,262	+				-0.4
1,178,272	+				-0.4
1,178,280	-				-1.0
1,178,301	-				+0.2
1,178,337	+				+0.8
1,178,360	-				-0.6
1,178,369	+				+0.9
1,178,379	+				+1.3
1,178,379	+				+0.5
1,178,379	+				+0.5
1,178,387	-				-2.0
1,178,401	+				+0.7
1,178,414	+				-0.1
1,178,454	+				+0.4
1,178,456	+				-0.7
1,178,466	+				-2.3
1,178,466	+				+0.0
1,178,472	+				+0.4
1,178,472	+				+0.5
1,178,481	+				-0.5
1,178,487	+				-0.7
1,178,487	+				-0.7
1,178,487	+				+1.5
1,178,494	+				-0.1
1,178,495	-				+0.1
1,178,495	-				-1.1
1,178,502	-				-1.4
1,178,527	+				-1.1
1,178,544	-				+0.9
1,178,598	+				-0.5
1,178,603	+				-0.3
1,178,603	+				-0.5
1,178,605	+				-3.6
1,178,606	-				-1.0
1,178,606	-				+0.0
1,178,606	-				-1.7
1,178,618	-				-2.1
1,178,618	-				+0.4
1,178,619	-				+0.2
1,178,674	+				+0.4
1,178,697	-				+0.1
1,178,707	+		BWI76_RS05620	0.10	+0.3
1,178,707	-		BWI76_RS05620	0.10	+0.7
1,178,759	-		BWI76_RS05620	0.14	-0.3
1,178,783	+		BWI76_RS05620	0.15	-0.8
1,178,783	+		BWI76_RS05620	0.15	-2.6
1,178,783	+		BWI76_RS05620	0.15	-0.1
1,178,819	-		BWI76_RS05620	0.18	+0.2
1,178,841	+		BWI76_RS05620	0.19	+0.3
1,178,841	+		BWI76_RS05620	0.19	-0.7
1,178,922	+		BWI76_RS05620	0.25	+2.5
1,178,922	+		BWI76_RS05620	0.25	-0.8
1,178,942	+		BWI76_RS05620	0.26	-1.3
1,178,957	+		BWI76_RS05620	0.27	-0.5
1,178,957	+		BWI76_RS05620	0.27	-1.3
1,178,965	-		BWI76_RS05620	0.28	-0.8
1,178,975	+		BWI76_RS05620	0.29	-0.0
1,179,145	+		BWI76_RS05620	0.40	-0.5
1,179,403	+		BWI76_RS05620	0.58	-0.2
1,179,467	+		BWI76_RS05620	0.63	-1.0
1,179,783	+		BWI76_RS05620	0.84	-0.4
1,179,859	+		BWI76_RS05620	0.90	-1.1
1,180,028	-				+0.8
1,180,062	+				-0.4
1,180,371	+		BWI76_RS05625	0.44	-0.2
1,180,659	-				+0.1
1,180,702	+				+0.4
1,180,710	-				+1.0
1,180,729	+				-1.0
1,180,851	+		BWI76_RS05630	0.14	+0.1
1,180,941	-		BWI76_RS05630	0.19	-1.2