Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22415 and BWI76_RS22420 are separated by 56 nucleotides BWI76_RS22420 and BWI76_RS22425 are separated by 177 nucleotides
BWI76_RS22415: BWI76_RS22415 - transcriptional regulator, at 4,674,048 to 4,674,962
_RS22415
BWI76_RS22420: BWI76_RS22420 - LacI family transcriptional regulator, at 4,675,019 to 4,675,981
_RS22420
BWI76_RS22425: BWI76_RS22425 - metal ABC transporter substrate-binding protein, at 4,676,159 to 4,677,076
_RS22425
Position (kb)
4675
4676 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4674.152 kb on - strand, within BWI76_RS22415 at 4674.162 kb on - strand at 4674.188 kb on + strand, within BWI76_RS22415 at 4674.196 kb on - strand, within BWI76_RS22415 at 4674.242 kb on + strand, within BWI76_RS22415 at 4674.381 kb on - strand, within BWI76_RS22415 at 4674.629 kb on + strand, within BWI76_RS22415 at 4674.744 kb on - strand, within BWI76_RS22415 at 4674.794 kb on + strand, within BWI76_RS22415 at 4674.802 kb on - strand, within BWI76_RS22415 at 4674.832 kb on - strand, within BWI76_RS22415 at 4674.895 kb on - strand at 4674.948 kb on - strand at 4674.948 kb on - strand at 4674.948 kb on - strand at 4674.986 kb on - strand at 4674.989 kb on - strand at 4675.075 kb on - strand at 4675.132 kb on - strand, within BWI76_RS22420 at 4675.258 kb on + strand, within BWI76_RS22420 at 4676.162 kb on - strand at 4676.162 kb on - strand at 4676.183 kb on + strand at 4676.191 kb on - strand at 4676.220 kb on - strand at 4676.463 kb on - strand, within BWI76_RS22425 at 4676.521 kb on + strand, within BWI76_RS22425 at 4676.646 kb on - strand, within BWI76_RS22425 at 4676.724 kb on - strand, within BWI76_RS22425 at 4676.764 kb on - strand, within BWI76_RS22425 at 4676.816 kb on - strand, within BWI76_RS22425
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,674,152 - BWI76_RS22415 0.11 -0.0 4,674,162 - +1.0 4,674,188 + BWI76_RS22415 0.15 +0.2 4,674,196 - BWI76_RS22415 0.16 +0.6 4,674,242 + BWI76_RS22415 0.21 +0.2 4,674,381 - BWI76_RS22415 0.36 +0.2 4,674,629 + BWI76_RS22415 0.63 +0.5 4,674,744 - BWI76_RS22415 0.76 +0.2 4,674,794 + BWI76_RS22415 0.82 +1.6 4,674,802 - BWI76_RS22415 0.82 -1.7 4,674,832 - BWI76_RS22415 0.86 -0.7 4,674,895 - -3.1 4,674,948 - +0.8 4,674,948 - +0.3 4,674,948 - +0.2 4,674,986 - +4.0 4,674,989 - +1.0 4,675,075 - +0.2 4,675,132 - BWI76_RS22420 0.12 -2.6 4,675,258 + BWI76_RS22420 0.25 -3.2 4,676,162 - +0.8 4,676,162 - +0.5 4,676,183 + +0.4 4,676,191 - +0.2 4,676,220 - -1.5 4,676,463 - BWI76_RS22425 0.33 -1.5 4,676,521 + BWI76_RS22425 0.39 -2.5 4,676,646 - BWI76_RS22425 0.53 -0.8 4,676,724 - BWI76_RS22425 0.62 -1.0 4,676,764 - BWI76_RS22425 0.66 +0.4 4,676,816 - BWI76_RS22425 0.72 +0.4
Or see this region's nucleotide sequence