Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21110 and BWI76_RS21115 are separated by 208 nucleotides BWI76_RS21115 and BWI76_RS21120 are separated by 32 nucleotides BWI76_RS21120 and BWI76_RS21125 are separated by 96 nucleotides
BWI76_RS21110: BWI76_RS21110 - hypothetical protein, at 4,418,006 to 4,422,952
_RS21110
BWI76_RS21115: BWI76_RS21115 - 3-mercaptopyruvate sulfurtransferase, at 4,423,161 to 4,424,006
_RS21115
BWI76_RS21120: BWI76_RS21120 - enhanced serine sensitivity protein SseB, at 4,424,039 to 4,424,815
_RS21120
BWI76_RS21125: BWI76_RS21125 - aminopeptidase PepB, at 4,424,912 to 4,426,198
_RS21125
Position (kb)
4423
4424
4425 Strain fitness (log2 ratio)
-1
0
1
2 at 4422.255 kb on + strand, within BWI76_RS21110 at 4422.492 kb on - strand at 4422.517 kb on - strand at 4422.519 kb on + strand at 4422.606 kb on - strand at 4422.653 kb on + strand at 4422.894 kb on + strand at 4423.226 kb on + strand at 4423.482 kb on - strand, within BWI76_RS21115 at 4423.578 kb on - strand, within BWI76_RS21115 at 4423.745 kb on + strand, within BWI76_RS21115 at 4423.980 kb on + strand at 4424.282 kb on + strand, within BWI76_RS21120 at 4424.282 kb on + strand, within BWI76_RS21120 at 4424.282 kb on + strand, within BWI76_RS21120 at 4424.290 kb on - strand, within BWI76_RS21120 at 4424.290 kb on - strand at 4424.292 kb on - strand, within BWI76_RS21120 at 4424.384 kb on - strand, within BWI76_RS21120 at 4424.529 kb on + strand, within BWI76_RS21120 at 4424.681 kb on - strand, within BWI76_RS21120
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,422,255 + BWI76_RS21110 0.86 +0.1 4,422,492 - +0.3 4,422,517 - -1.0 4,422,519 + -1.0 4,422,606 - +1.3 4,422,653 + +0.6 4,422,894 + -0.2 4,423,226 + +0.3 4,423,482 - BWI76_RS21115 0.38 -1.3 4,423,578 - BWI76_RS21115 0.49 -0.6 4,423,745 + BWI76_RS21115 0.69 -0.8 4,423,980 + +0.4 4,424,282 + BWI76_RS21120 0.31 +2.0 4,424,282 + BWI76_RS21120 0.31 +1.1 4,424,282 + BWI76_RS21120 0.31 +0.4 4,424,290 - BWI76_RS21120 0.32 +1.7 4,424,290 - -1.0 4,424,292 - BWI76_RS21120 0.33 -0.6 4,424,384 - BWI76_RS21120 0.44 +0.3 4,424,529 + BWI76_RS21120 0.63 +0.8 4,424,681 - BWI76_RS21120 0.83 +0.0
Or see this region's nucleotide sequence