Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20965 and BWI76_RS20970 overlap by 4 nucleotides BWI76_RS20970 and BWI76_RS20975 are separated by 43 nucleotides
BWI76_RS20965: BWI76_RS20965 - phosphoribosylformylglycinamidine cyclo-ligase, at 4,382,370 to 4,383,407
_RS20965
BWI76_RS20970: BWI76_RS20970 - phosphoribosylglycinamide formyltransferase, at 4,383,404 to 4,384,045
_RS20970
BWI76_RS20975: BWI76_RS20975 - hypothetical protein, at 4,384,089 to 4,385,447
_RS20975
Position (kb)
4383
4384
4385 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4382.628 kb on - strand, within BWI76_RS20965 at 4382.639 kb on - strand, within BWI76_RS20965 at 4383.163 kb on - strand, within BWI76_RS20965 at 4383.337 kb on - strand at 4383.346 kb on - strand at 4383.379 kb on + strand at 4383.431 kb on + strand at 4383.859 kb on + strand, within BWI76_RS20970 at 4384.255 kb on + strand, within BWI76_RS20975 at 4384.435 kb on - strand, within BWI76_RS20975 at 4384.529 kb on - strand, within BWI76_RS20975 at 4384.759 kb on - strand, within BWI76_RS20975 at 4384.787 kb on - strand, within BWI76_RS20975 at 4384.884 kb on + strand, within BWI76_RS20975 at 4384.922 kb on - strand, within BWI76_RS20975 at 4384.923 kb on - strand, within BWI76_RS20975 at 4384.953 kb on - strand, within BWI76_RS20975 at 4384.978 kb on + strand, within BWI76_RS20975 at 4384.983 kb on + strand, within BWI76_RS20975
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 4,382,628 - BWI76_RS20965 0.25 -1.6 4,382,639 - BWI76_RS20965 0.26 -4.1 4,383,163 - BWI76_RS20965 0.76 -2.1 4,383,337 - +0.6 4,383,346 - -1.6 4,383,379 + -1.3 4,383,431 + +0.4 4,383,859 + BWI76_RS20970 0.71 -1.3 4,384,255 + BWI76_RS20975 0.12 -0.9 4,384,435 - BWI76_RS20975 0.25 -1.3 4,384,529 - BWI76_RS20975 0.32 +0.2 4,384,759 - BWI76_RS20975 0.49 -0.4 4,384,787 - BWI76_RS20975 0.51 +0.9 4,384,884 + BWI76_RS20975 0.58 +1.3 4,384,922 - BWI76_RS20975 0.61 -0.1 4,384,923 - BWI76_RS20975 0.61 -0.6 4,384,953 - BWI76_RS20975 0.64 +1.3 4,384,978 + BWI76_RS20975 0.65 +1.3 4,384,983 + BWI76_RS20975 0.66 -0.4
Or see this region's nucleotide sequence