Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15650 and BWI76_RS15655 are separated by 14 nucleotides BWI76_RS15655 and BWI76_RS15660 overlap by 14 nucleotides BWI76_RS15660 and BWI76_RS15665 are separated by 31 nucleotides
BWI76_RS15650: BWI76_RS15650 - gp5, at 3,270,488 to 3,271,837
_RS15650
BWI76_RS15655: BWI76_RS15655 - hypothetical protein, at 3,271,852 to 3,273,330
_RS15655
BWI76_RS15660: BWI76_RS15660 - hypothetical protein, at 3,273,317 to 3,273,796
_RS15660
BWI76_RS15665: BWI76_RS15665 - hypothetical protein, at 3,273,828 to 3,274,475
_RS15665
Position (kb)
3271
3272
3273
3274 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 3271.112 kb on + strand, within BWI76_RS15650 at 3271.293 kb on + strand, within BWI76_RS15650 at 3271.323 kb on - strand, within BWI76_RS15650 at 3271.383 kb on - strand, within BWI76_RS15650 at 3272.277 kb on + strand, within BWI76_RS15655 at 3272.345 kb on - strand, within BWI76_RS15655 at 3272.599 kb on - strand, within BWI76_RS15655 at 3272.599 kb on - strand, within BWI76_RS15655 at 3272.633 kb on - strand, within BWI76_RS15655 at 3272.936 kb on + strand, within BWI76_RS15655 at 3272.993 kb on + strand, within BWI76_RS15655 at 3273.020 kb on - strand, within BWI76_RS15655 at 3273.088 kb on + strand, within BWI76_RS15655 at 3273.123 kb on + strand, within BWI76_RS15655 at 3273.196 kb on + strand at 3273.209 kb on - strand at 3273.415 kb on + strand, within BWI76_RS15660 at 3273.809 kb on + strand at 3273.817 kb on - strand at 3273.817 kb on - strand at 3273.867 kb on - strand at 3273.918 kb on - strand, within BWI76_RS15665 at 3274.043 kb on - strand, within BWI76_RS15665 at 3274.069 kb on + strand, within BWI76_RS15665 at 3274.327 kb on + strand, within BWI76_RS15665
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 3,271,112 + BWI76_RS15650 0.46 -1.8 3,271,293 + BWI76_RS15650 0.60 -0.0 3,271,323 - BWI76_RS15650 0.62 -2.3 3,271,383 - BWI76_RS15650 0.66 -2.0 3,272,277 + BWI76_RS15655 0.29 -0.9 3,272,345 - BWI76_RS15655 0.33 -1.5 3,272,599 - BWI76_RS15655 0.51 -2.7 3,272,599 - BWI76_RS15655 0.51 -2.7 3,272,633 - BWI76_RS15655 0.53 -1.6 3,272,936 + BWI76_RS15655 0.73 -2.0 3,272,993 + BWI76_RS15655 0.77 -5.0 3,273,020 - BWI76_RS15655 0.79 -0.7 3,273,088 + BWI76_RS15655 0.84 -0.0 3,273,123 + BWI76_RS15655 0.86 -1.2 3,273,196 + +0.2 3,273,209 - +0.5 3,273,415 + BWI76_RS15660 0.20 -0.8 3,273,809 + -3.2 3,273,817 - -0.5 3,273,817 - +2.3 3,273,867 - -3.6 3,273,918 - BWI76_RS15665 0.14 -0.5 3,274,043 - BWI76_RS15665 0.33 -0.2 3,274,069 + BWI76_RS15665 0.37 +1.3 3,274,327 + BWI76_RS15665 0.77 -3.6
Or see this region's nucleotide sequence